Solyc12g014150.3.1 (Solyc12g014150)

Aliases : Solyc12g014150

Description : no hits & (original description: none)

Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g014150.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00151130	evm_27.TU.AmTr_v1...	No description available	0.06	OrthoFinder output from all 47 species
AT1G73170	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.08	OrthoFinder output from all 47 species
Adi_g108757	SPD1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g112939	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g02605	SPD1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g07290	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g15207	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g18245	SPD1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g06608	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g15547	SPD1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene24193.t1	Aspi01Gene24193	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.08G016100.1	Ceric.08G016100	not classified & original description: pacid=50637973...	0.03	OrthoFinder output from all 47 species
Ceric.34G074300.1	SPD1, Ceric.34G074300	not classified & original description: pacid=50622982...	0.03	OrthoFinder output from all 47 species
Cre17.g716050	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dcu_g05731	SPD1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g18471	SPD1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01014235001	No alias	No description available	0.03	OrthoFinder output from all 47 species
LOC_Os06g06190.1	LOC_Os06g06190	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os12g10640.1	LOC_Os12g10640	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
MA_10427944g0010	SPD1	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp5g22990.1	SPD1	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Nbi_g02253	SPD1	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g10530	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g21651	SPD1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g08230	SPD1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g13769	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo410877	SPD1	No description available	0.03	OrthoFinder output from all 47 species
Zm00001e000530_P004	Zm00001e000530	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e030045_P004	Zm00001e030045	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	191	277

External Links

No external refs found!

Solyc12g014150.3.1 (Solyc12g014150)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation