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  5. Solyc11g065490.2.1

Solyc11g065490.2.1 (Solyc11g065490)


Aliases : Solyc11g065490

Description : Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana (sp|q94cj5|rer4_arath : 404.0)


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g065490.2.1

Target Alias Description ECC score Gene Family Method Actions
AT3G56140 No alias Protein of unknown function (DUF399 and DUF3411) 0.03 OrthoFinder output from all 47 species
Aspi01Gene63796.t1 Aspi01Gene63796 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000863.14 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001086.2 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g72710.1 LOC_Os01g72710 Protein RETICULATA-RELATED 4, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g11070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g08400.1 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Sam_g15403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g35505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018574_P001 Zm00001e018574 Protein RETICULATA-RELATED 4, chloroplastic... 0.04 OrthoFinder output from all 47 species
Zm00001e019415_P003 Zm00001e019415 Protein RETICULATA-RELATED 6, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 175 353
No external refs found!