1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g027830.2.1

Solyc11g027830.2.1 (Solyc11g027830)


Aliases : Solyc11g027830

Description : protease (LON)


Gene families : OG0007337 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007337_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g027830.2.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Aev_g01969 No alias LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05621 No alias LON-type protease & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23627 No alias LON-type protease & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.36G014100.1 Ceric.36G014100 LON-type protease & original description: pacid=50568163... 0.04 OrthoFinder output from all 47 species
Cre16.g669450 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre16.g670500 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01026088001 No alias Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
LOC_Os11g11210.1 LOC_Os11g11210 protease (LON) 0.04 OrthoFinder output from all 47 species
MA_10429530g0010 No alias protease (LON) 0.03 OrthoFinder output from all 47 species
Mp3g09810.1 No alias protease (LON) 0.05 OrthoFinder output from all 47 species
Msp_g12501 No alias LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11137 No alias LON-type protease & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19600 No alias LON-type protease & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021400_P001 Zm00001e021400 protease (LON) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003111 Lon_prtase_N 54 263
No external refs found!