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  5. Solyc11g007830.2.1

Solyc11g007830.2.1 (ATSEX4, ATPTPKIS1,...)


Aliases : ATSEX4, ATPTPKIS1, DSP4, SEX4, Solyc11g007830

Description : phosphoglucan phosphatase (SEX4)


Gene families : OG0007107 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g007830.2.1

Target Alias Description ECC score Gene Family Method Actions
AT3G52180 ATSEX4,... dual specificity protein phosphatase (DsPTP1) family protein 0.02 OrthoFinder output from all 47 species
Azfi_s0046.g030185 ATSEX4,... phosphoglucan phosphatase *(SEX4) & original... 0.03 OrthoFinder output from all 47 species
Ceric.28G036700.1 ATSEX4,... phosphoglucan phosphatase *(SEX4) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g36677 ATSEX4,... phosphoglucan phosphatase *(SEX4) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17030 No alias phosphoglucan phosphatase *(SEX4) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA Interproscan
BP GO:0016311 dephosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 245 330
IPR000340 Dual-sp_phosphatase_cat-dom 130 225
No external refs found!