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  5. Solyc10g045420.3.1

Solyc10g045420.3.1 (Solyc10g045420)


Aliases : Solyc10g045420

Description : O-fucosyltransferase 20 OS=Arabidopsis thaliana (sp|o64884|oft20_arath : 652.0)


Gene families : OG0000732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g045420.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00204610 evm_27.TU.AmTr_v1... O-fucosyltransferase 20 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00123p00067240 evm_27.TU.AmTr_v1... O-fucosyltransferase 20 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G44500 No alias O-fucosyltransferase family protein 0.09 OrthoFinder output from all 47 species
AT3G07900 No alias O-fucosyltransferase family protein 0.04 OrthoFinder output from all 47 species
Aob_g21694 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56789.t1 Aspi01Gene56789 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025459 No alias not classified & original description: CDS=895-2859 0.03 OrthoFinder output from all 47 species
Azfi_s1119.g097756 No alias not classified & original description: CDS=323-553 0.02 OrthoFinder output from all 47 species
Cba_g20829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G034900.1 Ceric.12G034900 not classified & original description: pacid=50601326... 0.06 OrthoFinder output from all 47 species
Dac_g04677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_11996 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Len_g13118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g59119 RHS17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_341382g0010 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_4230873g0010 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_70931g0030 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp4g16660.1 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g02365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012080 No alias not classified & original description: CDS=1-2013 0.03 OrthoFinder output from all 47 species
Sam_g15746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo171255 No alias O-fucosyltransferase 29 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo76196 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g112070.4.1 Solyc01g112070 O-fucosyltransferase 6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc12g098400.2.1 Solyc12g098400 O-fucosyltransferase 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g12202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 114 431
No external refs found!