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Aliases : Solyc10g007840
Description : component GatA of glutamyl-tRNA-dependent amidotransferase complex
Gene families : OG0005328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005328_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc10g007840.3.1 | |
| Cluster | HCCA: Cluster_133 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G25660 | No alias | Amidase family protein | 0.12 | OrthoFinder output from all 47 species | |
| Cba_g08123 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G091800.1 | Ceric.09G091800 | component *(GatA) of glutamyl-tRNA-dependent... | 0.12 | OrthoFinder output from all 47 species | |
| Cre10.g439400 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g08150 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01020788001 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os04g55050.1 | LOC_Os04g55050 | component GatA of glutamyl-tRNA-dependent... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g23600 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g08069 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10436166g0010 | No alias | component GatA of glutamyl-tRNA-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g01690.1 | No alias | component GatA of glutamyl-tRNA-dependent... | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g28904 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c16_16670V3.1 | Pp3c16_16670 | Amidase family protein | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g10248 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39506 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g51291 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12039 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006778_P003 | Zm00001e006778 | component GatA of glutamyl-tRNA-dependent... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004019 | adenylosuccinate synthase activity | IEP | HCCA |
| MF | GO:0004177 | aminopeptidase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023631 | Amidase_dom | 56 | 503 |
| No external refs found! |