- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc08g081770
Description : manganese/calcium cation transporter (BICAT)
Gene families : OG0000681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000681_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc08g081770.3.1 | |
| Cluster | HCCA: Cluster_133 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G64150 | No alias | Uncharacterized protein family (UPF0016) | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g049937 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02221 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07045 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01813 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g39299 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g30835 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0226.g058999 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g17433 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G012000.1 | Ceric.30G012000 | manganese/calcium cation transporter *(BICAT) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.31G008500.1 | Ceric.31G008500 | manganese/calcium cation transporter *(BICAT) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000711.67 | No alias | Protein PAM71-homolog, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Cre16.g660000 | No alias | Solute transport.carrier-mediated transport.PAM71... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31401 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g11604 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g31351 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02423 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01019449001 | No alias | Solute transport.carrier-mediated transport.PAM71... | 0.13 | OrthoFinder output from all 47 species | |
| GSVIVT01029035001 | No alias | Solute transport.carrier-mediated transport.PAM71... | 0.1 | OrthoFinder output from all 47 species | |
| Gb_24383 | No alias | manganese/calcium cation transporter (BICAT) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g12220.1 | LOC_Os01g12220 | manganese/calcium cation transporter (BICAT) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g34180.1 | LOC_Os11g34180 | manganese/calcium cation transporter (BICAT) | 0.11 | OrthoFinder output from all 47 species | |
| Len_g10003 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g01398 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.07 | OrthoFinder output from all 47 species | |
| MA_10427482g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| MA_9249169g0010 | No alias | manganese/calcium cation transporter (BICAT) | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g21360.1 | No alias | manganese/calcium cation transporter (BICAT) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11243 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00803 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g06932 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15318 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10173 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0079.g017813 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13196 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15730 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09226 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g11326 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44935 | No alias | manganese/calcium cation transporter *(BICAT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008707_P003 | Zm00001e008707 | manganese/calcium cation transporter (BICAT) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026075_P001 | Zm00001e026075 | manganese/calcium cation transporter (BICAT) | 0.13 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004832 | valine-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006438 | valyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| No external refs found! |