Solyc07g055710.3.1 (HSFA4C, RHA1,...)

Aliases : HSFA4C, RHA1, AT-HSFA4C, Solyc07g055710

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g055710.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00209530	HSFA1E,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
AMTR_s00073p00033500	HSFB4, SCZ,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
AMTR_s00132p00118400	HSF4, HSFB1,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
AT4G18880	HSF A4A, AT-HSFA4A	heat shock transcription factor A4A	0.11	OrthoFinder output from all 47 species
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.05	OrthoFinder output from all 47 species
Adi_g036860	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g17013	HSFA1E, ATHSFA1E	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g41017	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g01284	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g01320	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g09418	ATHSFA1D, HSFA1D	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g14735	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g24142	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g30082	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g51704	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g05891	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g41074	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene34153.t1	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g06430	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g78307	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.15G065200.1	HSFA1E,...	HSF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.29G078200.1	HSFB4, SCZ,...	HSF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g33781	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03864	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g31570	HSFA1E, ATHSFA1E	transcriptional regulator *(HsfA1) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g04697	HSF4, HSFB1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10301	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13990	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01002066001	AT-HSFB2A, HSFB2A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
GSVIVT01020781001	HSFA4C, RHA1, AT-HSFA4C	RNA biosynthesis.transcriptional activation.HSF (heat...	0.06	OrthoFinder output from all 47 species
GSVIVT01033257001	AT-HSFB3, HSFB3	RNA biosynthesis.transcriptional activation.HSF (heat...	0.06	OrthoFinder output from all 47 species
LOC_Os02g32590.1	HSFA3, AT-HSFA3,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
LOC_Os05g45410.1	HSF A4A,...	transcription factor (HSF)	0.07	OrthoFinder output from all 47 species
LOC_Os09g28354.1	HSF4, HSFB1,...	transcription factor (HSF)	0.07	OrthoFinder output from all 47 species
Lfl_g27595	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_41252g0020	HSFA1B, ATHSF3,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
MA_8812600g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Msp_g21406	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g11876	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g24032	HSF A4A, AT-HSFA4A	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g27452	AT-HSFA5, HSFA5	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g30346	HSF A4A, AT-HSFA4A	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g33571	ATHSFA1D, HSFA1D	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g06083	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g19936	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g30272	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g07494	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g12599	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g48572	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g48573	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021246	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=1-1665	0.04	OrthoFinder output from all 47 species
Sam_g14010	No alias	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g40245	No alias	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Smo39384	HSF A4A, AT-HSFA4A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
Smo93081	ATHSFA1D, HSFA1D	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
Solyc02g079180.1.1	AT-HSFA6B,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Solyc02g090820.3.1	HSF4, HSFB1,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc04g016000.3.1	AT-HSFB3, HSFB3,...	transcription factor (HSF)	0.06	OrthoFinder output from all 47 species
Solyc06g053960.3.1	AT-HSFA6B,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc08g076590.3.1	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.05	OrthoFinder output from all 47 species
Solyc09g059520.3.1	HSFA8, AT-HSFA8,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Spa_g11248	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g55040	HSF4, HSFB1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g07369	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e009944_P001	HSF4, HSFB1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e014583_P001	AT-HSFA5, HSFA5,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e032174_P001	HSFA4C, RHA1,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e034336_P001	HSFB4, SCZ,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	16	105

External Links

No external refs found!

Solyc07g055710.3.1 (HSFA4C, RHA1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation