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  5. Solyc07g042910.4.1

Solyc07g042910.4.1 (Solyc07g042910)


Aliases : Solyc07g042910

Description : no hits & (original description: none)


Gene families : OG0006431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g042910.4.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Adi_g061060 No alias sporopollenin export factor *(IEF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03394 No alias sporopollenin export factor *(IEF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15643 No alias sporopollenin export factor *(IEF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09837 No alias sporopollenin export factor *(IEF) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08472 No alias sporopollenin export factor *(IEF) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G095700.1 Ceric.05G095700 sporopollenin export factor *(IEF) & original... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020693.34 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre16.g680450 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g03155 No alias sporopollenin export factor *(IEF) & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01034254001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_19912 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os02g26984.1 LOC_Os02g26984 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g08862 No alias sporopollenin export factor *(IEF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08870 No alias sporopollenin export factor *(IEF) & original description: none 0.08 OrthoFinder output from all 47 species
MA_7751496g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g06720.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02450 No alias sporopollenin export factor *(IEF) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10920 No alias sporopollenin export factor *(IEF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56591 No alias sporopollenin export factor *(IEF) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006229 No alias sporopollenin export factor *(IEF) & original... 0.03 OrthoFinder output from all 47 species
Smo75529 No alias No description available 0.03 OrthoFinder output from all 47 species
Tin_g12803 No alias sporopollenin export factor *(IEF) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e014525_P003 Zm00001e014525 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!