Solyc07g021180.3.1 (ATPB, PB, Solyc07g021180)

Aliases : ATPB, PB, Solyc07g021180

Description : ATP synthase subunit beta, chloroplastic OS=Nicotiana sp. (sp|p26531|atpb_nicsp : 198.0)

Gene families : OG0000973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000973_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g021180.3.1
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272630	ATPB, PB,...	ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda	0.03	OrthoFinder output from all 47 species
ATCG00480	ATPB, PB	ATP synthase subunit beta	0.03	OrthoFinder output from all 47 species
Aev_g10806	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Als_g61401	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g06682	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Ceric.02G014100.1	ATPB, PB, Ceric.02G014100	not classified & original description: pacid=50586216...	0.04	OrthoFinder output from all 47 species
Ceric.09G048700.1	ATPB, PB, Ceric.09G048700	subunit beta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Cre17.g698000	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.01	OrthoFinder output from all 47 species
Dcu_g20874	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
LOC_Os01g25065.1	ATPB, PB, LOC_Os01g25065	ATP synthase subunit beta, chloroplastic OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
LOC_Os05g35320.1	ATPB, PB, LOC_Os05g35320	ATP synthase subunit beta, chloroplastic OS=Oryza sativa...	0.11	OrthoFinder output from all 47 species
LOC_Os06g39740.1	ATPB, PB, LOC_Os06g39740	subunit beta of peripheral CF1 subcomplex of ATP synthase complex	0.1	OrthoFinder output from all 47 species
LOC_Os10g21266.1	ATPB, PB, LOC_Os10g21266	subunit beta of peripheral CF1 subcomplex of ATP synthase complex	0.04	OrthoFinder output from all 47 species
LOC_Os12g10570.1	ATPB, PB, LOC_Os12g10570	ATP synthase subunit beta, chloroplastic OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Len_g25468	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Lfl_g05507	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Mp2g15450.1	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.02	OrthoFinder output from all 47 species
Nbi_g06174	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Ore_g00399	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010854	ATPB, PB	not classified & original description: CDS=1-264	0.02	OrthoFinder output from all 47 species
Sam_g02504	No alias	subunit beta of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Spa_g51445	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Zm00001e032346_P003	Zm00001e032346	subunit beta of ATP synthase peripheral MF1 subcomplex	0.02	OrthoFinder output from all 47 species
Zm00001e042082_P001	ATPB, PB, Zm00001e042082	ATP synthase subunit beta, chloroplastic OS=Zea mays...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	IEA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004100	ATPase_F1/V1/A1_a/bsu_N	22	87

External Links

No external refs found!

Solyc07g021180.3.1 (ATPB, PB, Solyc07g021180)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation