Aliases : ATDEF1, PDF1A, Solyc07g015860
Description : formylmethionine deformylase (PDF)
Gene families : OG0007852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007852_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00081p00136350 | ATDEF1, PDF1A,... | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017280001 | ATDEF1, PDF1A | Protein biosynthesis.organelle translation... | 0.05 | OrthoFinder output from all 47 species | |
Gb_04790 | ATDEF1, PDF1A | formylmethionine deformylase (PDF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g37510.1 | ATDEF1, PDF1A,... | formylmethionine deformylase (PDF) | 0.05 | OrthoFinder output from all 47 species | |
MA_395770g0010 | ATDEF1, PDF1A | formylmethionine deformylase (PDF) | 0.02 | OrthoFinder output from all 47 species | |
Pir_g00884 | ATDEF1, PDF1A | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g25193 | No alias | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023635 | Peptide_deformylase | 90 | 255 |
No external refs found! |