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  5. Solyc06g083980.3.1

Solyc06g083980.3.1 (Solyc06g083980)


Aliases : Solyc06g083980

Description : transcription factor (bHLH)


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g083980.3.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00226670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT2G46510 AIB, ATAIB ABA-inducible BHLH-type transcription factor 0.04 OrthoFinder output from all 47 species
AT5G46760 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.06 OrthoFinder output from all 47 species
Adi_g018534 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079557 AIB, ATAIB bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086893 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099729 NIG1, ATNIG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03963 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05717 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05383 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g22120 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29942 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025419 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2238 0.03 OrthoFinder output from all 47 species
Cba_g02697 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g33047 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59208 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G060700.1 Ceric.15G060700 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.33G048200.1 Ceric.33G048200 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G007700.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g01841 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07082 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000771001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.09 OrthoFinder output from all 47 species
GSVIVT01013156001 ATMYC2, MYC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
GSVIVT01027162001 No alias Transcription factor bHLH13 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01027412001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_04728 ATMYC2, MYC2,... no description available(sp|a0a3q7hrz6|myc2_sollc : 189.0) 0.03 OrthoFinder output from all 47 species
Gb_10001 ATMYC2, MYC2,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g10776 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06164 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_5838g0020 ATMYC2, MYC2,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MpVg00340.1 ATMYC2, MYC2,... No annotation 0.03 OrthoFinder output from all 47 species
Msp_g07889 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14442 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15105 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03760 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06669 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19559 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42150 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09679 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29687 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005797 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2391 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026359 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2571 0.03 OrthoFinder output from all 47 species
Spa_g06271 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49121 ATMYC2, MYC2,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g52382 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55797 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28428 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 331 377
IPR025610 MYC/MYB_N 49 227
No external refs found!