Coexpression cluster: Cluster_105 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005681 spliceosomal complex 3.28% (2/61) 7.54 4.7e-05 0.007672
GO:0000398 mRNA splicing, via spliceosome 3.28% (2/61) 6.54 0.000206 0.008381
GO:0000375 RNA splicing, via transesterification reactions 3.28% (2/61) 6.54 0.000206 0.008381
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 3.28% (2/61) 6.54 0.000206 0.008381
GO:0008380 RNA splicing 3.28% (2/61) 6.13 0.000372 0.012134
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 1.64% (1/61) 9.13 0.00179 0.018237
GO:0090305 nucleic acid phosphodiester bond hydrolysis 1.64% (1/61) 9.13 0.00179 0.018237
GO:0000469 cleavage involved in rRNA processing 1.64% (1/61) 9.13 0.00179 0.018237
GO:0090501 RNA phosphodiester bond hydrolysis 1.64% (1/61) 9.13 0.00179 0.018237
GO:0045944 positive regulation of transcription by RNA polymerase II 1.64% (1/61) 9.13 0.00179 0.018237
GO:0034243 regulation of transcription elongation by RNA polymerase II 1.64% (1/61) 9.13 0.00179 0.018237
GO:0032786 positive regulation of DNA-templated transcription, elongation 1.64% (1/61) 9.13 0.00179 0.018237
GO:0032784 regulation of DNA-templated transcription elongation 1.64% (1/61) 9.13 0.00179 0.018237
GO:0019905 syntaxin binding 1.64% (1/61) 9.13 0.00179 0.018237
GO:0000149 SNARE binding 1.64% (1/61) 9.13 0.00179 0.018237
GO:1990904 ribonucleoprotein complex 3.28% (2/61) 4.88 0.002126 0.020384
GO:1903508 positive regulation of nucleic acid-templated transcription 1.64% (1/61) 8.13 0.003577 0.025351
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 1.64% (1/61) 8.13 0.003577 0.025351
GO:0045893 positive regulation of DNA-templated transcription 1.64% (1/61) 8.13 0.003577 0.025351
GO:0051254 positive regulation of RNA metabolic process 1.64% (1/61) 8.13 0.003577 0.025351
GO:1902680 positive regulation of RNA biosynthetic process 1.64% (1/61) 8.13 0.003577 0.025351
GO:0090079 translation regulator activity, nucleic acid binding 3.28% (2/61) 4.37 0.004249 0.026636
GO:0045182 translation regulator activity 3.28% (2/61) 4.37 0.004249 0.026636
GO:0008135 translation factor activity, RNA binding 3.28% (2/61) 4.37 0.004249 0.026636
GO:0016071 mRNA metabolic process 3.28% (2/61) 4.32 0.004562 0.02754
GO:0006397 mRNA processing 3.28% (2/61) 4.54 0.003372 0.030538
GO:0016070 RNA metabolic process 6.56% (4/61) 2.46 0.00602 0.035047
GO:0005634 nucleus 4.92% (3/61) 2.96 0.0069 0.038782
GO:0003743 translation initiation factor activity 3.28% (2/61) 5.13 0.00151 0.041032
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_56 0.015 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_150 0.018 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_153 0.021 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_133 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_41 0.019 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_91 0.016 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_108 0.023 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_122 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_101 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_185 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_205 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_250 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_12 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_291 0.023 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_314 0.025 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_317 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_123 0.028 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_141 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_111 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_26 0.018 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_199 0.019 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_263 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_23 0.02 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_80 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_81 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_121 0.022 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_16 0.022 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_117 0.019 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_136 0.022 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_176 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_195 0.025 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_219 0.021 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_23 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_115 0.015 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_140 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_165 0.031 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_50 0.018 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_79 0.021 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_16 0.041 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_93 0.016 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_98 0.024 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_46 0.021 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_5 0.021 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_13 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_128 0.021 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_26 0.018 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_1 0.018 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_187 0.019 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_45 0.019 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_158 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_58 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_79 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_105 0.027 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_174 0.018 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_113 0.022 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_116 0.04 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_140 0.023 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_143 0.029 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_223 0.023 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_225 0.02 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_13 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_15 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_126 0.02 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_30 0.018 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_58 0.02 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_74 0.028 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_60 0.02 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_64 0.02 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_87 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_3 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_16 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_129 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_161 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_201 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_314 0.016 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_166 0.021 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_14 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_31 0.019 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_50 0.029 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_95 0.022 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_115 0.02 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_93 0.018 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_101 0.018 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_120 0.023 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_137 0.025 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_365 0.015 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_24 0.057 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_60 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_94 0.02 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_125 0.017 OrthoFinder output from all 47 species Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms