Solyc06g072980.4.1 (Solyc06g072980)

Aliases : Solyc06g072980

Description : accessory component ATG13 of ATG1-13 autophagosome assembly control complex

Gene families : OG0001611 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001611_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g072980.4.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G49590	No alias	Autophagy-related protein 13	0.02	OrthoFinder output from all 47 species
Aev_g14640	No alias	accessory component *(ATG13) of ATG1-13 autophagosome...	0.03	OrthoFinder output from all 47 species
Aop_g32834	No alias	accessory component *(ATG13) of ATG1-13 autophagosome...	0.02	OrthoFinder output from all 47 species
Msp_g01670	No alias	accessory component *(ATG13) of ATG1-13 autophagosome...	0.05	OrthoFinder output from all 47 species
Msp_g08109	No alias	accessory component *(ATG13) of ATG1-13 autophagosome...	0.02	OrthoFinder output from all 47 species
Nbi_g17636	No alias	accessory component *(ATG13) of ATG1-13 autophagosome...	0.04	OrthoFinder output from all 47 species
Pir_g14191	No alias	accessory component *(ATG13) of ATG1-13 autophagosome...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006914	autophagy	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902554	serine/threonine protein kinase complex	None	Extended
CC	GO:1902911	protein kinase complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended
CC	GO:1990316	Atg1/ULK1 kinase complex	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
BP	GO:0006672	ceramide metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018731	Atg13_N	20	213

External Links

No external refs found!