Solyc06g054490.3.1 (Solyc06g054490)

Aliases : Solyc06g054490

Description : prolyl hydroxylase

Gene families : OG0000256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g054490.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G43080	AT-P4H-1	P4H isoform 1	0.03	OrthoFinder output from all 47 species
AT3G06300	AT-P4H-2	P4H isoform 2	0.05	OrthoFinder output from all 47 species
AT4G25600	No alias	Oxoglutarate/iron-dependent oxygenase	0.03	OrthoFinder output from all 47 species
AT5G18900	No alias	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase...	0.04	OrthoFinder output from all 47 species
Aev_g07639	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g05251	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g11608	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38007	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0034.g025231	No alias	prolyl hydroxylase & original description: CDS=301-966	0.03	OrthoFinder output from all 47 species
Cba_g03040	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Cre03.g160200	No alias	Protein modification.hydroxylation.prolyl hydroxylase	0.04	OrthoFinder output from all 47 species
Dcu_g01241	No alias	prolyl hydroxylase & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g11274	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11275	No alias	prolyl hydroxylase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g19230	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_33258	No alias	prolyl hydroxylase	0.03	OrthoFinder output from all 47 species
LOC_Os05g41010.1	LOC_Os05g41010	prolyl hydroxylase	0.02	OrthoFinder output from all 47 species
LOC_Os10g27340.2	LOC_Os10g27340	prolyl hydroxylase	0.04	OrthoFinder output from all 47 species
Lfl_g27361	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
MA_4082125g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp5g14080.1	No alias	prolyl hydroxylase	0.03	OrthoFinder output from all 47 species
Nbi_g11882	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g11000	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007186	No alias	prolyl hydroxylase & original description: CDS=65-1096	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026933	No alias	prolyl hydroxylase & original description: CDS=1324-1983	0.02	OrthoFinder output from all 47 species
Smo411114	No alias	Protein modification.hydroxylation.prolyl hydroxylase	0.03	OrthoFinder output from all 47 species
Zm00001e008483_P001	AT-P4H-1, Zm00001e008483	prolyl hydroxylase	0.02	OrthoFinder output from all 47 species
Zm00001e012813_P001	Zm00001e012813	prolyl hydroxylase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0005319	lipid transporter activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0033897	ribonuclease T2 activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0120009	intermembrane lipid transfer	IEP	HCCA
MF	GO:0120013	lipid transfer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003582	ShKT_dom	254	295
IPR005123	Oxoglu/Fe-dep_dioxygenase	121	241

External Links

No external refs found!

Solyc06g054490.3.1 (Solyc06g054490)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation