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Aliases : Solyc05g013740
Description : Coilin OS=Arabidopsis thaliana (sp|q8rwk8|coil_arath : 162.0)
Gene families : OG0006961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006961_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc05g013740.3.1 | |
| Cluster | HCCA: Cluster_74 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G13030 | No alias | sphere organelles protein-related | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g056217 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g21891 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21336 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g32147 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09840 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene69482.t1 | Aspi01Gene69482 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G019000.1 | Ceric.31G019000 | scaffold factor *(COILIN) of Cajal body formation &... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020930.21 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g45248 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02841 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g19040.1 | LOC_Os12g19040 | Coilin OS=Arabidopsis thaliana (sp|q8rwk8|coil_arath : 137.0) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10431309g0010 | No alias | Coilin OS=Arabidopsis thaliana (sp|q8rwk8|coil_arath : 94.7) | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g22520.1 | No alias | Coilin OS=Arabidopsis thaliana (sp|q8rwk8|coil_arath : 98.6) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18525 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g25243 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16616 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g28987 | No alias | scaffold factor *(COILIN) of Cajal body formation &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e040792_P001 | Zm00001e040792 | Coilin OS=Arabidopsis thaliana (sp|q8rwk8|coil_arath : 220.0) | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR031722 | Coilin_N | 4 | 212 |
| No external refs found! |