Coexpression cluster: Cluster_74 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 6.52% (9/138) 3.56 0.0 1.5e-05
GO:0006397 mRNA processing 2.9% (4/138) 4.36 4.4e-05 0.002763
GO:0034641 cellular nitrogen compound metabolic process 10.14% (14/138) 1.67 0.000137 0.003721
GO:0016071 mRNA metabolic process 2.9% (4/138) 4.14 8e-05 0.003815
GO:0006364 rRNA processing 2.17% (3/138) 4.95 0.000124 0.003914
GO:0016072 rRNA metabolic process 2.17% (3/138) 4.95 0.000124 0.003914
GO:0016070 RNA metabolic process 6.52% (9/138) 2.46 4.3e-05 0.004093
GO:0090304 nucleic acid metabolic process 6.52% (9/138) 2.09 0.00029 0.006891
GO:0030684 preribosome 1.45% (2/138) 5.78 0.000575 0.012147
GO:0005694 chromosome 1.45% (2/138) 5.63 0.000717 0.013629
GO:0000375 RNA splicing, via transesterification reactions 1.45% (2/138) 5.36 0.001046 0.015295
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.45% (2/138) 5.36 0.001046 0.015295
GO:0000398 mRNA splicing, via spliceosome 1.45% (2/138) 5.36 0.001046 0.015295
GO:0031047 RNA-mediated gene silencing 1.45% (2/138) 5.25 0.001233 0.01674
GO:0043232 intracellular non-membrane-bounded organelle 5.07% (7/138) 2.08 0.001419 0.016846
GO:0043228 non-membrane-bounded organelle 5.07% (7/138) 2.08 0.001419 0.016846
GO:0006139 nucleobase-containing compound metabolic process 6.52% (9/138) 1.7 0.001981 0.020906
GO:0008380 RNA splicing 1.45% (2/138) 4.95 0.001883 0.021041
GO:0051276 chromosome organization 1.45% (2/138) 4.36 0.004239 0.023689
GO:0000350 generation of catalytic spliceosome for second transesterification step 0.72% (1/138) 7.95 0.00405 0.024046
GO:0016575 histone deacetylation 0.72% (1/138) 7.95 0.00405 0.024046
GO:0098732 macromolecule deacylation 0.72% (1/138) 7.95 0.00405 0.024046
GO:0006476 protein deacetylation 0.72% (1/138) 7.95 0.00405 0.024046
GO:0035601 protein deacylation 0.72% (1/138) 7.95 0.00405 0.024046
GO:0000176 nuclear exosome (RNase complex) 0.72% (1/138) 7.95 0.00405 0.024046
GO:0000178 exosome (RNase complex) 0.72% (1/138) 7.95 0.00405 0.024046
GO:1901360 organic cyclic compound metabolic process 6.52% (9/138) 1.53 0.004208 0.024231
GO:0034470 ncRNA processing 2.17% (3/138) 3.18 0.004557 0.02474
GO:0010629 negative regulation of gene expression 1.45% (2/138) 4.63 0.002949 0.026684
GO:0043229 intracellular organelle 6.52% (9/138) 1.61 0.002917 0.027709
GO:0043226 organelle 6.52% (9/138) 1.61 0.002917 0.027709
GO:0016570 histone modification 1.45% (2/138) 4.19 0.005348 0.028228
GO:0006725 cellular aromatic compound metabolic process 6.52% (9/138) 1.57 0.003516 0.029046
GO:0046483 heterocycle metabolic process 6.52% (9/138) 1.58 0.003365 0.029064
GO:0009892 negative regulation of metabolic process 1.45% (2/138) 4.42 0.003896 0.029611
GO:0010605 negative regulation of macromolecule metabolic process 1.45% (2/138) 4.42 0.003896 0.029611
GO:0004017 adenylate kinase activity 0.72% (1/138) 6.95 0.008084 0.035718
GO:0016776 phosphotransferase activity, phosphate group as acceptor 0.72% (1/138) 6.95 0.008084 0.035718
GO:0030688 preribosome, small subunit precursor 0.72% (1/138) 6.95 0.008084 0.035718
GO:0050145 nucleoside monophosphate kinase activity 0.72% (1/138) 6.95 0.008084 0.035718
GO:1905354 exoribonuclease complex 0.72% (1/138) 6.95 0.008084 0.035718
GO:0031491 nucleosome binding 0.72% (1/138) 6.95 0.008084 0.035718
GO:0048519 negative regulation of biological process 1.45% (2/138) 3.99 0.007011 0.036003
GO:0003676 nucleic acid binding 10.14% (14/138) 1.04 0.008645 0.037332
GO:1990904 ribonucleoprotein complex 1.45% (2/138) 3.7 0.010406 0.043935
GO:0022618 ribonucleoprotein complex assembly 0.72% (1/138) 6.36 0.012101 0.047899
GO:0071826 ribonucleoprotein complex subunit organization 0.72% (1/138) 6.36 0.012101 0.047899
GO:0005840 ribosome 3.62% (5/138) 1.88 0.011952 0.049367
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_151 0.018 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_153 0.035 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_187 0.027 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_31 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_176 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_321 0.022 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_123 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_19 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_61 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_96 0.041 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_22 0.019 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_92 0.049 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_109 0.021 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_134 0.019 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_145 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_170 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_236 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_53 0.034 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_66 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_283 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_328 0.026 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_12 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_17 0.021 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_42 0.019 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_45 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_83 0.015 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_138 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_154 0.019 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_37 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_64 0.023 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_85 0.02 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_93 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_105 0.018 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_241 0.025 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_269 0.017 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_14 0.038 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_19 0.017 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_23 0.029 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_40 0.024 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_75 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_81 0.021 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_121 0.061 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_127 0.037 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_130 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_57 0.06 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_117 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_123 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_175 0.03 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_184 0.022 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_23 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_26 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_35 0.032 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_79 0.019 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_90 0.026 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_16 0.021 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_36 0.016 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_41 0.019 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_44 0.017 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_61 0.021 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_62 0.016 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_98 0.022 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_161 0.041 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_45 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_49 0.015 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_73 0.026 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_88 0.022 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_144 0.02 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_33 0.021 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_63 0.034 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_71 0.016 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_41 0.023 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_56 0.034 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_62 0.023 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_64 0.021 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_153 0.016 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_40 0.024 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_101 0.016 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_118 0.035 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_137 0.022 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_150 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_58 0.119 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_65 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_130 0.035 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_142 0.035 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_146 0.054 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_150 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_170 0.023 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_110 0.034 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_130 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_193 0.016 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_241 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_72 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_106 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_132 0.021 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_200 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_223 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_224 0.025 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_236 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_20 0.031 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_41 0.019 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_77 0.026 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_47 0.017 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_108 0.015 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_141 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_27 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_94 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_153 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_268 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_10 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_13 0.033 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_28 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_56 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_91 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_93 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_141 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_143 0.021 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_145 0.035 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_146 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_172 0.034 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_181 0.057 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_47 0.02 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_61 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_45 0.018 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_105 0.028 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_42 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_49 0.019 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_60 0.025 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_64 0.051 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_8 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_9 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_17 0.018 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_56 0.039 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_84 0.028 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_136 0.019 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_51 0.052 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_73 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_158 0.015 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_30 0.018 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_62 0.036 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_75 0.023 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_95 0.045 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_132 0.036 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_170 0.045 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_18 0.021 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_24 0.097 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_31 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_97 0.02 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_127 0.018 OrthoFinder output from all 47 species Compare
Sequences (138) (download table)

InterPro Domains

GO Terms

Family Terms