Solyc04g077220.3.1 (HAT22, Solyc04g077220)

Aliases : HAT22, Solyc04g077220

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000538 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g077220.3.1
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00245530	HAT9,...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00026p00233150	HAT22,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AT2G22800	HAT9	Homeobox-leucine zipper protein family	0.02	OrthoFinder output from all 47 species
Adi_g003788	HAT22	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g021164	HAT14	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g082135	HAT22	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g46962	HAT14	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0658.g081288	HAT3	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Cba_g33158	HAT14	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.03G085600.1	HAT22, Ceric.03G085600	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dac_g10914	HAT3	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dcu_g14029	HAT14	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dcu_g32935	HB-2, ATHB2, ATHB-2, HAT4	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ehy_g23304	HAT14	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01009274001	HAT22	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Len_g11143	HAT14	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
MA_12174g0010	HAT22	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
MA_60457g0010	HAT14	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
MA_78381g0010	HAT22	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Nbi_g18932	HAT14	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017947	HAT14	not classified & original description: CDS=450-2336	0.02	OrthoFinder output from all 47 species
Solyc02g063520.3.1	HAT22, Solyc02g063520	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
Solyc05g008050.3.1	ATHB17, HB17,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc08g007270.4.1	HB-2, ATHB2,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Zm00001e000928_P002	HAT22, Zm00001e000928	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Zm00001e009939_P001	HAT14, Zm00001e009939	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Zm00001e038644_P001	HAT22, Zm00001e038644	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	120	174
IPR003106	Leu_zip_homeo	176	210

External Links

No external refs found!

Solyc04g077220.3.1 (HAT22, Solyc04g077220)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation