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  5. Solyc04g026380.4.1

Solyc04g026380.4.1 (HAP13, Solyc04g026380)


Aliases : HAP13, Solyc04g026380

Description : AP-1 complex subunit mu-2 OS=Arabidopsis thaliana (sp|o22715|ap1m2_arath : 410.0)


Gene families : OG0003200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g026380.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00250090 HAP13,... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
AT1G60780 HAP13 Clathrin adaptor complexes medium subunit family protein 0.09 OrthoFinder output from all 47 species
Aev_g12966 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
Ala_g12148 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Als_g08881 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Als_g34154 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Als_g52859 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Aop_g02146 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Azfi_s0024.g020466 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Azfi_s0069.g036494 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Cba_g06963 HAP13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32283 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021181.5 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Cre06.g262250 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
Dcu_g08729 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Dcu_g08796 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Ehy_g19498 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
GSVIVT01004093001 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
LOC_Os01g50770.1 HAP13, LOC_Os01g50770 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
LOC_Os05g46550.1 HAP13, LOC_Os05g46550 medium subunit mu of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
Lfl_g06990 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
MA_10431966g0010 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
MA_178144g0010 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Msp_g12532 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Nbi_g02172 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Ore_g19019 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Ppi_g03776 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Sam_g09529 No alias medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Smo91068 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Spa_g04731 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Tin_g03338 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Zm00001e020037_P003 HAP13, Zm00001e020037 AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR028565 MHD 1 218
No external refs found!