1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g009630.3.1

Solyc04g009630.3.1 (Solyc04g009630)


Aliases : Solyc04g009630

Description : Alpha-glucosidase OS=Spinacia oleracea (sp|o04893|aglu_spiol : 1128.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 739.2)


Gene families : OG0001972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g009630.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00038550 ATXYL1, XYL1,... Cell wall.hemicellulose.xyloglucan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00134420 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.modification and... 0.03 OrthoFinder output from all 47 species
Als_g08905 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01037959001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.08 OrthoFinder output from all 47 species
LOC_Os01g03950.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species
Mp8g10240.1 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.02 OrthoFinder output from all 47 species
Solyc04g007150.3.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR031727 Gal_mutarotase_N 58 198
IPR025887 Glyco_hydro_31_N_dom 203 269
IPR000322 Glyco_hydro_31 290 757
No external refs found!