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  5. Solyc04g006970.4.1

Solyc04g006970.4.1 (ATPPC4, PPC4, Solyc04g006970)


Aliases : ATPPC4, PPC4, Solyc04g006970

Description : PEP carboxylase


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g006970.4.1

Target Alias Description ECC score Gene Family Method Actions
AT3G14940 ATPPC3, PPC3 phosphoenolpyruvate carboxylase 3 0.03 OrthoFinder output from all 47 species
Aob_g09049 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14699.t1 ATPPC3, PPC3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010453 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: CDS=306-3104 0.02 OrthoFinder output from all 47 species
Cba_g14717 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G026100.1 ATPPC3, PPC3,... EC_4.1 carbon-carbon lyase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g21254 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23356 PPC2, ATPPC2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08955 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11765 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011979001 ATPPC4, PPC4 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.03 OrthoFinder output from all 47 species
GSVIVT01020705001 ATPPC3, PPC3 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.04 OrthoFinder output from all 47 species
LOC_Os02g14770.1 PPC2, ATPPC2,... PEP carboxylase 0.02 OrthoFinder output from all 47 species
Len_g30934 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06687 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g11340.1 PPC2, ATPPC2 PEP carboxylase 0.02 OrthoFinder output from all 47 species
Msp_g15812 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20099 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02364 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05923 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002475 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: CDS=296-3220 0.03 OrthoFinder output from all 47 species
Sam_g18853 No alias PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11401 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR021135 PEP_COase 446 1050
IPR021135 PEP_COase 145 333
No external refs found!