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  5. Solyc03g093370.2.1

Solyc03g093370.2.1 (DYAD, SWI1, Solyc03g093370)


Aliases : DYAD, SWI1, Solyc03g093370

Description : DYAD/SWI1 meiotic recombination regulating protein


Gene families : OG0003886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003886_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g093370.2.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00232360 DYAD, SWI1,... Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder output from all 47 species
Azfi_s0078.g038181 DYAD, SWI1 regulatory protein *(DYAD/SWI1) of meiotic recombination... 0.03 OrthoFinder output from all 47 species
Ceric.01G089800.1 Ceric.01G089800 not classified & original description: pacid=50592389... 0.02 OrthoFinder output from all 47 species
Ceric.24G022600.1 DYAD, SWI1,... regulatory protein *(DYAD/SWI1) of meiotic recombination... 0.06 OrthoFinder output from all 47 species
Dac_g00920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001705001 VAMP726, ATVAMP726 No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01003609001 DYAD, SWI1 Cell cycle.mitosis and meiosis.meiotic... 0.1 OrthoFinder output from all 47 species
Ore_g43047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49981 DYAD, SWI1 regulatory protein *(DYAD/SWI1) of meiotic recombination... 0.05 OrthoFinder output from all 47 species
Zm00001e012383_P003 DYAD, SWI1,... DYAD/SWI1 meiotic recombination regulating protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!