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Aliases : Solyc03g007110
Description : plant-specific stabilizing component ClpT of chloroplast Clp-type protease complex
Gene families : OG0007488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007488_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc03g007110.3.1 | |
| Cluster | HCCA: Cluster_133 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00059p00213590 | evm_27.TU.AmTr_v1... | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G12060 | No alias | Double Clp-N motif protein | 0.07 | OrthoFinder output from all 47 species | |
| AT4G25370 | No alias | Double Clp-N motif protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g100657 | No alias | plant-specific stabilizing component *(ClpT) of... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g19961 | No alias | plant-specific stabilizing component *(ClpT) of... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0072.g037001 | No alias | plant-specific stabilizing component *(ClpT) of... | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g05046 | No alias | plant-specific stabilizing component *(ClpT) of... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G099200.1 | Ceric.02G099200 | plant-specific stabilizing component *(ClpT) of... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g32107 | No alias | plant-specific stabilizing component *(ClpT) of... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g16574 | No alias | plant-specific stabilizing component *(ClpT) of... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g10685 | No alias | plant-specific stabilizing component *(ClpT) of... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018510001 | No alias | Protein degradation.peptidase families.serine-type... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g14280.1 | LOC_Os03g14280 | plant-specific stabilizing component ClpT of chloroplast... | 0.15 | OrthoFinder output from all 47 species | |
| Len_g10201 | No alias | plant-specific stabilizing component *(ClpT) of... | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g19150.1 | No alias | plant-specific stabilizing component ClpT of chloroplast... | 0.12 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007541 | No alias | plant-specific stabilizing component *(ClpT) of... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04464 | No alias | plant-specific stabilizing component *(ClpT) of... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001033_P002 | Zm00001e001033 | plant-specific stabilizing component ClpT of chloroplast... | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e038581_P001 | Zm00001e038581 | plant-specific stabilizing component ClpT of chloroplast... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| No external refs found! |