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  5. Solyc02g093170.4.1

Solyc02g093170.4.1 (Solyc02g093170)


Aliases : Solyc02g093170

Description : cyclin (CYL1)


Gene families : OG0005268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g093170.4.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00066360 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYL1-type cyclin 0.03 OrthoFinder output from all 47 species
AT4G34090 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.13 OrthoFinder output from all 47 species
Aev_g24415 No alias regulatory protein *(CYL1) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ala_g20281 No alias regulatory protein *(CYL1) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene64369.t1 Aspi01Gene64369 regulatory protein *(CYL1) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023546 No alias regulatory protein *(CYL1) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Cba_g21580 No alias regulatory protein *(CYL1) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Ceric.28G068500.1 Ceric.28G068500 regulatory protein *(CYL1) of cell cycle & original... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000325.10 No alias Cell cycle.regulation.cyclins.CYL1-type cyclin 0.02 OrthoFinder output from all 47 species
Cre13.g563150 No alias Cell cycle.regulation.cyclins.CYL1-type cyclin 0.02 OrthoFinder output from all 47 species
Dac_g02687 No alias regulatory protein *(CYL1) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dcu_g41538 No alias regulatory protein *(CYL1) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Dde_g03340 No alias regulatory protein *(CYL1) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ehy_g00848 No alias regulatory protein *(CYL1) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01031712001 No alias Cell cycle.regulation.cyclins.CYL1-type cyclin 0.2 OrthoFinder output from all 47 species
Lfl_g17217 No alias regulatory protein *(CYL1) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Mp5g13100.1 No alias cyclin (CYL1) 0.03 OrthoFinder output from all 47 species
Nbi_g07783 No alias regulatory protein *(CYL1) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ore_g44541 No alias regulatory protein *(CYL1) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g63720 No alias regulatory protein *(CYL1) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sam_g52804 No alias regulatory protein *(CYL1) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g16379 No alias regulatory protein *(CYL1) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Tin_g12606 No alias regulatory protein *(CYL1) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Zm00001e039091_P001 Zm00001e039091 cyclin (CYL1) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!