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  5. Solyc02g032960.2.1

Solyc02g032960.2.1 (emb2458, Solyc02g032960)


Aliases : emb2458, Solyc02g032960

Description : Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana (sp|f4j3n2|ftsi5_arath : 1270.0)


Gene families : OG0007060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g032960.2.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00154620 emb2458,... Probable inactive ATP-dependent zinc metalloprotease... 0.03 OrthoFinder output from all 47 species
AT3G04340 emb2458 FtsH extracellular protease family 0.09 OrthoFinder output from all 47 species
Adi_g013441 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.02 OrthoFinder output from all 47 species
Aop_g58398 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053499 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.03 OrthoFinder output from all 47 species
Ceric.05G031500.1 Ceric.05G031500 not classified & original description: pacid=50577604... 0.02 OrthoFinder output from all 47 species
Ceric.26G060900.1 emb2458, Ceric.26G060900 component *(FtsHi) of protein translocation ATPase motor... 0.03 OrthoFinder output from all 47 species
Ehy_g04057 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.04 OrthoFinder output from all 47 species
GSVIVT01021791001 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.1 OrthoFinder output from all 47 species
Gb_28496 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.03 OrthoFinder output from all 47 species
Len_g01924 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.05 OrthoFinder output from all 47 species
Lfl_g22625 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.04 OrthoFinder output from all 47 species
MA_10435946g0010 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.04 OrthoFinder output from all 47 species
MA_9758g0010 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.04 OrthoFinder output from all 47 species
Mp6g10290.1 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.06 OrthoFinder output from all 47 species
Ore_g16438 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026312 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.03 OrthoFinder output from all 47 species
Sam_g14588 No alias component *(FtsHi) of protein translocation ATPase motor... 0.02 OrthoFinder output from all 47 species
Spa_g05748 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0003937 IMP cyclohydrolase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 797 930
No external refs found!