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  5. Solyc01g111980.3.1

Solyc01g111980.3.1 (Solyc01g111980)


Aliases : Solyc01g111980

Description : amino acid transporter (LHT)


Gene families : OG0003545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g111980.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00244480 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
Aob_g05213 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G076600.1 Ceric.29G076600 amino acid transporter *(LHT) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g19490 No alias amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09420 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12161 No alias amino acid transporter *(LHT) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g25615 No alias amino acid transporter *(LHT) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01023906001 No alias Solute transport.carrier-mediated transport.APC... 0.1 OrthoFinder output from all 47 species
MA_141g0010 No alias amino acid transporter (LHT) 0.02 OrthoFinder output from all 47 species
Msp_g11633 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11797 No alias amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g26639 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29558 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10277 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04722 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18946 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021601 No alias amino acid transporter *(LHT) & original description:... 0.03 OrthoFinder output from all 47 species
Zm00001e041487_P001 Zm00001e041487 amino acid transporter (LHT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 140 554
No external refs found!