1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g104920.3.1

Solyc01g104920.3.1 (NSF, Solyc01g104920)


Aliases : NSF, Solyc01g104920

Description : Vesicle-fusing ATPase OS=Arabidopsis thaliana (sp|q9m0y8|nsf_arath : 1123.0) & Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase acting on acid anhydride(50.3.6 : 929.0)


Gene families : OG0003720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003720_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g104920.3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G04910 NSF AAA-type ATPase family protein 0.12 OrthoFinder output from all 47 species
Ala_g06284 NSF EC_3.6 hydrolase acting on acid anhydride & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0064.g035585 NSF EC_3.6 hydrolase acting on acid anhydride & original... 0.06 OrthoFinder output from all 47 species
Ceric.07G070600.1 NSF, Ceric.07G070600 EC_3.6 hydrolase acting on acid anhydride & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01014341001 NSF Vesicle-fusing ATPase OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os05g44310.1 NSF, LOC_Os05g44310 Vesicle-fusing ATPase OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Lfl_g39534 NSF EC_3.6 hydrolase acting on acid anhydride & original... 0.04 OrthoFinder output from all 47 species
MA_10432698g0010 NSF Vesicle-fusing ATPase OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g03206 NSF EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Nbi_g25362 NSF EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Ore_g17441 NSF EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Ppi_g03180 NSF EC_3.6 hydrolase acting on acid anhydride & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000432 NSF EC_3.6 hydrolase acting on acid anhydride & original... 0.04 OrthoFinder output from all 47 species
Smo91155 NSF Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase... 0.12 OrthoFinder output from all 47 species
Zm00001e023104_P004 NSF, Zm00001e023104 Vesicle-fusing ATPase OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Zm00001e032225_P001 NSF, Zm00001e032225 Vesicle-fusing ATPase OS=Arabidopsis thaliana... 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 486 597
IPR003959 ATPase_AAA_core 205 345
IPR041569 AAA_lid_3 372 427
No external refs found!