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  5. Solyc01g098640.3.1

Solyc01g098640.3.1 (TLP18.3, Solyc01g098640)


Aliases : TLP18.3, Solyc01g098640

Description : Psb32 protein involved in PS-II assembly


Gene families : OG0007030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g098640.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00126870 TLP18.3,... Photosynthesis.photophosphorylation.photosystem... 0.19 OrthoFinder output from all 47 species
AT1G54780 TLP18.3 thylakoid lumen 18.3 kDa protein 0.19 OrthoFinder output from all 47 species
Adi_g001945 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.13 OrthoFinder output from all 47 species
Aev_g07030 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.09 OrthoFinder output from all 47 species
Ala_g01414 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.12 OrthoFinder output from all 47 species
Als_g32115 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.11 OrthoFinder output from all 47 species
Aob_g07689 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.07 OrthoFinder output from all 47 species
Aop_g08442 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.13 OrthoFinder output from all 47 species
Aspi01Gene13421.t1 TLP18.3, Aspi01Gene13421 protein involved in PS-II assembly *(Psb32) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0054.g033664 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.05 OrthoFinder output from all 47 species
Cba_g08697 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.08 OrthoFinder output from all 47 species
Ceric.05G027600.1 TLP18.3, Ceric.05G027600 protein involved in PS-II assembly *(Psb32) & original... 0.17 OrthoFinder output from all 47 species
Cre03.g182150 TLP18.3 Photosynthesis.photophosphorylation.photosystem... 0.13 OrthoFinder output from all 47 species
Dac_g09996 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.11 OrthoFinder output from all 47 species
Dcu_g00821 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.12 OrthoFinder output from all 47 species
Dde_g47338 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g06594 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.09 OrthoFinder output from all 47 species
GSVIVT01000004001 TLP18.3 Photosynthesis.photophosphorylation.photosystem... 0.12 OrthoFinder output from all 47 species
LOC_Os05g33280.1 TLP18.3, LOC_Os05g33280 Psb32 protein involved in PS-II assembly 0.19 OrthoFinder output from all 47 species
Len_g16675 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.14 OrthoFinder output from all 47 species
Lfl_g03752 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.06 OrthoFinder output from all 47 species
MA_10433010g0010 TLP18.3 Psb32 protein involved in PS-II assembly 0.13 OrthoFinder output from all 47 species
Mp8g16080.1 TLP18.3 Psb32 protein involved in PS-II assembly 0.22 OrthoFinder output from all 47 species
Msp_g03092 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.17 OrthoFinder output from all 47 species
Nbi_g17006 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.09 OrthoFinder output from all 47 species
Pir_g00411 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.15 OrthoFinder output from all 47 species
Pnu_g12645 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.09 OrthoFinder output from all 47 species
Pp3c11_19220V3.1 TLP18.3, Pp3c11_19220 thylakoid lumen 18.3 kDa protein 0.07 OrthoFinder output from all 47 species
Ppi_g17567 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.15 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007460 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.08 OrthoFinder output from all 47 species
Sam_g08275 No alias protein involved in PS-II assembly *(Psb32) & original... 0.07 OrthoFinder output from all 47 species
Smo127459 TLP18.3 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Spa_g05586 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.13 OrthoFinder output from all 47 species
Spa_g05587 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.16 OrthoFinder output from all 47 species
Tin_g07118 TLP18.3 protein involved in PS-II assembly *(Psb32) & original... 0.1 OrthoFinder output from all 47 species
Zm00001e026820_P001 TLP18.3, Zm00001e026820 Psb32 protein involved in PS-II assembly 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR007621 TPM_dom 104 227
No external refs found!