Solyc01g097320.3.1 (ATMED14, MED14, SWP,...)

Aliases : ATMED14, MED14, SWP, Solyc01g097320

Description : component MED14 of tail module of MEDIATOR transcription co-activator complex

Gene families : OG0003954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003954_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g097320.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00266990	ATMED14, MED14,...	RNA biosynthesis.RNA polymerase II-dependent...	0.07	OrthoFinder output from all 47 species
AT3G04740	ATMED14, MED14, SWP	RNA polymerase II transcription mediators	0.05	OrthoFinder output from all 47 species
Adi_g023669	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.02	OrthoFinder output from all 47 species
Als_g01988	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Aob_g36685	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Azfi_s0131.g049135	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Ceric.06G040100.1	ATMED14, MED14,...	component *(MED14) of tail module of MEDIATOR...	0.06	OrthoFinder output from all 47 species
Cre03.g190550	No alias	No description available	0.03	OrthoFinder output from all 47 species
Dde_g09727	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.02	OrthoFinder output from all 47 species
GSVIVT01021781001	ATMED14, MED14, SWP	RNA biosynthesis.RNA polymerase II-dependent...	0.04	OrthoFinder output from all 47 species
Gb_36567	ATMED14, MED14, SWP	component MED14 of tail module of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
LOC_Os09g10960.1	ATMED14, MED14,...	component MED14 of tail module of MEDIATOR transcription...	0.07	OrthoFinder output from all 47 species
Len_g30748	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Lfl_g05047	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Msp_g13510	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Ore_g38216	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Pir_g05142	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Pnu_g13861	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008172	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Sam_g17509	No alias	component *(MED14) of tail module of MEDIATOR...	0.02	OrthoFinder output from all 47 species
Smo90823	ATMED14, MED14, SWP	RNA biosynthesis.RNA polymerase II-dependent...	0.05	OrthoFinder output from all 47 species
Spa_g04873	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.09	OrthoFinder output from all 47 species
Zm00001e009618_P001	ATMED14, MED14,...	component MED14 of tail module of MEDIATOR transcription...	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0016592	mediator complex	IEA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013947	Mediator_Med14	9	197

External Links

No external refs found!

Solyc01g097320.3.1 (ATMED14, MED14, SWP,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation