Aliases : ATHEXP BETA 1.4, ATEXPB2, EXPB2, Solyc01g090810
Description : Putative expansin-B2 OS=Arabidopsis thaliana (sp|q9shy6|expb2_arath : 302.0)
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc01g090810.4.1 | |
Cluster | HCCA: Cluster_17 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00115760 | ATEXP7, EXPA7,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.07 | OrthoFinder output from all 47 species | |
AT1G65680 | ATHEXP BETA 1.4,... | expansin B2 | 0.07 | OrthoFinder output from all 47 species | |
AT3G45970 | ATEXLA1, EXPL1,... | expansin-like A1 | 0.03 | OrthoFinder output from all 47 species | |
AT4G38210 | ATEXPA20,... | expansin A20 | 0.05 | OrthoFinder output from all 47 species | |
AT5G39270 | EXPA22, ATEXP22,... | expansin A22 | 0.03 | OrthoFinder output from all 47 species | |
Aev_g17560 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g17605 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g21084 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aev_g37023 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g39346 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g36019 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene66973.t1 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0578.g078256 | EXPA16, ATHEXP... | alpha-class expansin & original description: CDS=388-1158 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g03639 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g06266 | ATEXPA4, ATEXP4,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g02593 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g18163 | EXP9, EXPA9,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g19493 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g24536 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g07390 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01005915001 | ATHEXP BETA 3.1,... | Cell wall.cell wall proteins.expansins.beta-like-type expansin | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01016525001 | ATEXPA4, ATEXP4,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01030191001 | No alias | Expansin-A8 OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01030192001 | No alias | Expansin-A2 OS=Oryza sativa subsp. japonica | 0.04 | OrthoFinder output from all 47 species | |
Gb_01502 | EXPA8, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Gb_01505 | EXPA8, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Gb_06127 | EXP15, ATEXPA15,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Gb_07439 | EXPA8, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Gb_16008 | EXP15, ATEXPA15,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Gb_24808 | ATEXLA1, EXPL1,... | alpha-like-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Gb_27617 | ATHEXP ALPHA... | Putative expansin-A17 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Gb_29322 | ATEXLA1, EXPL1,... | alpha-like-class expansin | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g06010.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Len_g03621 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g37319 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g59336 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g27479 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g39394 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10299189g0010 | EXPA8, ATHEXP... | Expansin-A8 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
MA_103404g0010 | EXPA16, ATHEXP... | alpha-class expansin | 0.06 | OrthoFinder output from all 47 species | |
MA_10429288g0010 | EXPA16, ATHEXP... | alpha-class expansin | 0.1 | OrthoFinder output from all 47 species | |
MA_651027g0010 | ATHEXP ALPHA... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Mp1g22700.1 | EXP15, ATEXPA15,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Mp2g18610.1 | ATEXPA4, ATEXP4,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Mp3g12300.2 | EXP15, ATEXPA15,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Mp8g18860.1 | ATEXPA4, ATEXP4,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Msp_g30638 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g37532 | EXPA8, ATHEXP... | alpha-class expansin & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g07225 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g25903 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g28493 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g07849 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g20019 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g27709 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g33848 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g40748 | ATEXPA10,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g44001 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g31032 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g10345 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g16237 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0024.g009021 | ATHEXP ALPHA... | not classified & original description: CDS=1-1083 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g28732 | No alias | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Sam_g29879 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo230202 | EXPA2, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | OrthoFinder output from all 47 species | |
Smo78615 | ATEXP7, EXPA7,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g112000.4.1 | ATEXLA1, EXPL1,... | alpha-like-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g093390.4.1 | ATHEXP BETA 1.4,... | Expansin-B15 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g115300.2.1 | ATHEXP ALPHA ... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g115310.1.1 | ATHEXP ALPHA ... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g077900.3.1 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g077910.3.1 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g018020.3.1 | EXPA8, ATHEXP... | alpha-class expansin | 0.04 | OrthoFinder output from all 47 species | |
Tin_g03797 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g31784 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e000429_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e004719_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e004720_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e014221_P001 | ATHEXP ALPHA... | Expansin-A22 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e014247_P001 | ATHEXP ALPHA... | Expansin-A23 OS=Oryza sativa subsp. japonica... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e017221_P001 | ATEXPA1, EXP1,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036907_P001 | ATHEXP BETA 1.4,... | Putative expansin-B14 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e037881_P001 | ATHEXP BETA 1.4,... | Expansin-B2 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e037884_P001 | ATHEXP BETA 1.4,... | Expansin-B6 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
MF | GO:0016829 | lyase activity | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
No external refs found! |