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  5. Solyc01g079660.2.1

Solyc01g079660.2.1 (Solyc01g079660)


Aliases : Solyc01g079660

Description : no hits & (original description: none)


Gene families : OG0008438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079660.2.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00210960 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00099370 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00082330 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G52140 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT3G16330 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT4G02170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.08 OrthoFinder output from all 47 species
AT4G29110 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT4G32860 No alias unknown protein; Has 46 Blast hits to 46 proteins in 10... 0.01 OrthoFinder output from all 47 species
AT5G38700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
Gb_01993 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_14247 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_14248 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_14965 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_29515 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10230764g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_429401g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_49467g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g21290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008480 DUF761_pln 153 187
No external refs found!