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  5. Solyc00g500150.1.1

Solyc00g500150.1.1 (RPL2.1, Solyc00g500150)


Aliases : RPL2.1, Solyc00g500150

Description : 50S ribosomal protein L2, chloroplastic OS=Nicotiana debneyi (sp|p21434|rk2_nicde : 187.0)


Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500150.1.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Aev_g14432 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aev_g24286 No alias component *(uL2m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Msp_g32319 RPL2 component *(uL2m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Msp_g48940 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Nbi_g04996 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc00g500035.1.1 RPL2.1, Solyc00g500035 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Solyc00g500047.1.1 RPL2.1, Solyc00g500047 50S ribosomal protein L2, chloroplastic OS=Solanum... 0.04 OrthoFinder output from all 47 species
Solyc00g500079.1.1 RPL2.1, Solyc00g500079 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Solyc00g500297.1.1 RPL2.1, Solyc00g500297 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Solyc05g023730.1.1 RPL2.1, Solyc05g023730 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.05 OrthoFinder output from all 47 species
Solyc09g050067.1.1 RPL2.1, Solyc09g050067 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.11 OrthoFinder output from all 47 species
Solyc09g050068.1.1 RPL2.1, Solyc09g050068 50S ribosomal protein L2, chloroplastic OS=Solanum... 0.09 OrthoFinder output from all 47 species
Zm00001e042370_P001 RPL2.1, Zm00001e042370 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 27 93
No external refs found!