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  5. Smo443180

Smo443180 (PDE318)


Aliases : PDE318

Description : Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana


Gene families : OG0006383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo443180

Target Alias Description ECC score Gene Family Method Actions
Cre08.g384355 No alias No description available 0.03 OrthoFinder output from all 47 species
Dde_g02181 PDE318 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022468001 PDE318 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os08g06230.1 PDE318, LOC_Os08g06230 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g10243 PDE318 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05831 PDE318 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040209_P002 PDE318, Zm00001e040209 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010674 NOG1_Rossman_fold_dom 309 366
No external refs found!