LOC_Os12g42230.1 (LOC_Os12g42230)


Aliases : LOC_Os12g42230

Description : subunit beta of E1 pyruvate dehydrogenase component


Gene families : OG0003592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003592_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g42230.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AT1G30120 PDH-E1 BETA pyruvate dehydrogenase E1 beta 0.03 OrthoFinder output from all 47 species
Ala_g24725 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Cre03.g194200 PDH-E1 BETA Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.01 OrthoFinder output from all 47 species
Gb_06066 No alias subunit beta of E1 pyruvate dehydrogenase component 0.02 OrthoFinder output from all 47 species
MA_118815g0010 No alias subunit beta of E1 pyruvate dehydrogenase component 0.03 OrthoFinder output from all 47 species
Mp6g00740.1 No alias subunit beta of E1 pyruvate dehydrogenase component 0.03 OrthoFinder output from all 47 species
Ppi_g13026 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Solyc08g016750.3.1 Solyc08g016750 subunit beta of E1 pyruvate dehydrogenase component 0.03 OrthoFinder output from all 47 species
Zm00001e003250_P002 Zm00001e003250 subunit beta of E1 pyruvate dehydrogenase component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 75 245
IPR033248 Transketolase_C 261 382
No external refs found!