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  5. LOC_Os12g33946.1

LOC_Os12g33946.1 (COX1, LOC_Os12g33946)


Aliases : COX1, LOC_Os12g33946

Description : component COX1 of cytochrome c oxidase complex


Gene families : OG0003734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g33946.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
ATMG01360 COX1 cytochrome oxidase 0.13 OrthoFinder output from all 47 species
Aev_g13913 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.08 OrthoFinder output from all 47 species
Ala_g26228 COX1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g39523 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.04 OrthoFinder output from all 47 species
Als_g03025 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.05 OrthoFinder output from all 47 species
Aob_g06478 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.07 OrthoFinder output from all 47 species
Aop_g15521 COX1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g25091 COX1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ceric.13G041500.1 Ceric.13G041500 not classified & original description: pacid=50636847... 0.05 OrthoFinder output from all 47 species
Ceric.17G026300.1 COX1, Ceric.17G026300 not classified & original description: pacid=50617973... 0.08 OrthoFinder output from all 47 species
Ceric.1Z245600.1 COX1, Ceric.1Z245600 not classified & original description: pacid=50638984... 0.04 OrthoFinder output from all 47 species
Ceric.1Z287000.1 COX1, Ceric.1Z287000 not classified & original description: pacid=50577020... 0.04 OrthoFinder output from all 47 species
Ceric.1Z295800.1 COX1, Ceric.1Z295800 not classified & original description: pacid=50613701... 0.04 OrthoFinder output from all 47 species
Ceric.1Z313900.1 COX1, Ceric.1Z313900 not classified & original description: pacid=50567670... 0.04 OrthoFinder output from all 47 species
Dcu_g47926 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.06 OrthoFinder output from all 47 species
Dde_g08450 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.04 OrthoFinder output from all 47 species
GSVIVT01020676001 COX1 Cytochrome c oxidase subunit 1 OS=Glycine max 0.05 OrthoFinder output from all 47 species
Gb_06295 No alias Cytochrome c oxidase subunit 1 OS=Raphanus sativus... 0.11 OrthoFinder output from all 47 species
Gb_31333 COX1 component COX1 of cytochrome c oxidase complex 0.1 OrthoFinder output from all 47 species
Len_g25342 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.05 OrthoFinder output from all 47 species
Lfl_g32196 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.1 OrthoFinder output from all 47 species
MA_10428650g0020 COX1 component COX1 of cytochrome c oxidase complex 0.03 OrthoFinder output from all 47 species
Msp_g31774 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.04 OrthoFinder output from all 47 species
Nbi_g21852 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.13 OrthoFinder output from all 47 species
Ore_g07659 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.06 OrthoFinder output from all 47 species
Pir_g02721 COX1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c4_28940V3.1 COX1, Pp3c4_28940 cytochrome oxidase 0.01 OrthoFinder output from all 47 species
Pp3c4_28946V3.1 COX1, Pp3c4_28946 cytochrome oxidase 0.01 OrthoFinder output from all 47 species
Ppi_g59291 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026928 COX1 not classified & original description: CDS=1-180 0.03 OrthoFinder output from all 47 species
Sam_g12101 No alias EC_1.9 oxidoreductase acting on heme group of donor &... 0.04 OrthoFinder output from all 47 species
Solyc00g500186.1.1 COX1, Solyc00g500186 component COX1 of cytochrome c oxidase complex 0.1 OrthoFinder output from all 47 species
Solyc00g500250.1.1 COX1, Solyc00g500250 component COX1 of cytochrome c oxidase complex 0.1 OrthoFinder output from all 47 species
Solyc00g500349.1.1 COX1, Solyc00g500349 component COX1 of cytochrome c oxidase complex 0.1 OrthoFinder output from all 47 species
Solyc07g019510.4.1 COX1, Solyc07g019510 component COX1 of cytochrome c oxidase complex 0.08 OrthoFinder output from all 47 species
Solyc11g063610.3.1 COX1, Solyc11g063610 Cytochrome c oxidase subunit 1 OS=Oenothera berteroana... 0.1 OrthoFinder output from all 47 species
Spa_g22204 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.07 OrthoFinder output from all 47 species
Tin_g21821 COX1 EC_1.9 oxidoreductase acTing on heme group of donor &... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEA Interproscan
BP GO:0009060 aerobic respiration IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000883 Cyt_C_Oxase_1 15 461
No external refs found!