LOC_Os12g07140.1 (AVA-2PE, AVA-P2,...)

Aliases : AVA-2PE, AVA-P2, ATVHA-C2, LOC_Os12g07140

Description : subunit c of V-type ATPase membrane V0 subcomplex

Gene families : OG0000979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g07140.1
Cluster	HCCA: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00172260	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.V-type ATPase...	0.03	OrthoFinder output from all 47 species
AMTR_s00182p00020350	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.V-type ATPase...	0.05	OrthoFinder output from all 47 species
AT4G34720	ATVHA-C1, AVA-P1, VHA-C1	ATPase, F0/V0 complex, subunit C protein	0.02	OrthoFinder output from all 47 species
Adi_g012522	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Adi_g039991	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Adi_g128873	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Ala_g16546	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Aop_g01495	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Aop_g03676	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Aop_g11476	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Azfi_s0129.g048983	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000989.42	No alias	Solute transport.primary active transport.V-type ATPase...	0.02	OrthoFinder output from all 47 species
Cre06.g257450	No alias	Solute transport.primary active transport.V-type ATPase...	0.04	OrthoFinder output from all 47 species
Dac_g15494	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Dcu_g05181	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Dde_g31734	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
GSVIVT01008858001	No alias	Solute transport.primary active transport.V-type ATPase...	0.03	OrthoFinder output from all 47 species
Mp5g23200.1	No alias	subunit c of V-type ATPase membrane V0 subcomplex	0.03	OrthoFinder output from all 47 species
Mp8g11230.1	No alias	subunit c of V-type ATPase membrane V0 subcomplex	0.04	OrthoFinder output from all 47 species
Msp_g03776	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Msp_g09900	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Msp_g40780	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Nbi_g18732	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Nbi_g32124	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ore_g35017	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Pnu_g24852	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Pp3c1_1260V3.1	AVA-2PE, AVA-P2,...	ATPase, F0/V0 complex, subunit C protein	0.01	OrthoFinder output from all 47 species
Pp3c2_36900V3.1	Pp3c2_36900	ATPase, F0/V0 complex, subunit C protein	0.01	OrthoFinder output from all 47 species
Ppi_g07229	AVA-2PE, AVA-P2, ATVHA-C2	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ppi_g24800	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002635	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016189	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Sam_g18200	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Sam_g26016	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Smo77154	No alias	Solute transport.primary active transport.V-type ATPase...	0.03	OrthoFinder output from all 47 species
Solyc02g084360.3.1	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.04	OrthoFinder output from all 47 species
Solyc04g081090.3.1	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.06	OrthoFinder output from all 47 species
Solyc10g054560.2.1	Solyc10g054560	subunit c of V-type ATPase membrane V0 subcomplex	0.04	OrthoFinder output from all 47 species
Solyc10g054570.2.1	Solyc10g054570	subunit c of V-type ATPase membrane V0 subcomplex	0.07	OrthoFinder output from all 47 species
Spa_g01896	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Spa_g02136	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.05	OrthoFinder output from all 47 species
Spa_g06323	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Spa_g41557	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.05	OrthoFinder output from all 47 species
Tin_g16194	No alias	subunit c of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Zm00001e009048_P001	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.09	OrthoFinder output from all 47 species
Zm00001e024502_P002	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.08	OrthoFinder output from all 47 species
Zm00001e029675_P001	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.03	OrthoFinder output from all 47 species
Zm00001e039470_P001	AVA-2PE, AVA-P2,...	subunit c of V-type ATPase membrane V0 subcomplex	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEA	Interproscan
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	HCCA
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002379	ATPase_proteolipid_c-like_dom	17	76
IPR002379	ATPase_proteolipid_c-like_dom	97	155

External Links

No external refs found!

LOC_Os12g07140.1 (AVA-2PE, AVA-P2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation