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  5. LOC_Os11g31890.1

LOC_Os11g31890.1 (ATCPL3, CPL3, LOC_Os11g31890)


Aliases : ATCPL3, CPL3, LOC_Os11g31890

Description : subcluster H/CPL3-4 phosphatase


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g31890.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00210270 ATCPL3, CPL3,... Protein modification.dephosphorylation.aspartate-based... 0.03 OrthoFinder output from all 47 species
AT2G33540 ATCPL3, CPL3 C-terminal domain phosphatase-like 3 0.09 OrthoFinder output from all 47 species
Adi_g045430 ATCPL3, CPL3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18359 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g31997 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21128.t1 ATCPL3, CPL3,... subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0070.g036738 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description:... 0.07 OrthoFinder output from all 47 species
Dcu_g09003 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g10325 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01004933001 ATCPL3, CPL3 Protein modification.dephosphorylation.aspartate-based... 0.08 OrthoFinder output from all 47 species
Len_g07570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02455 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435719g0010 CPL4 RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species
MA_2427g0010 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species
Mp1g29700.1 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species
Sam_g51799 No alias subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g063050.3.1 ATCPL3, CPL3,... subcluster H/CPL3-4 phosphatase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 960 1116
No external refs found!