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  5. LOC_Os11g19210.1

LOC_Os11g19210.1 (LOC_Os11g19210)


Aliases : LOC_Os11g19210

Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)


Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g19210.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246460 XYL4, ATBXL4,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00125p00113140 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
AT5G09730 BXL3, BX3, XYL3,... beta-xylosidase 3 0.03 OrthoFinder output from all 47 species
AT5G64570 XYL4, ATBXL4 beta-D-xylosidase 4 0.02 OrthoFinder output from all 47 species
Aev_g37060 XYL4, ATBXL4 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16446 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12761 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G017600.1 Ceric.31G017600 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.31G017800.1 Ceric.31G017800 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g06076 BXL3, BX3, XYL3,... EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25402 XYL4, ATBXL4 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017658001 BXL3, BX3, XYL3,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01017659001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01028104001 ATBXL2, BXL2 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.06 OrthoFinder output from all 47 species
GSVIVT01035033001 ATBXL1, BXL1 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01037844001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 OrthoFinder output from all 47 species
Gb_39728 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Len_g05441 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29235 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
MA_791061g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Nbi_g25216 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26394 BXL3, BX3, XYL3,... EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27870 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18870 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06957 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008480 No alias EC_3.2 glycosylase & original description: CDS=1-2670 0.03 OrthoFinder output from all 47 species
Sam_g12561 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g079570.3.1 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Spa_g42434 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015868_P001 Zm00001e015868 bifunctional alpha-L-arabinofuranosidase and... 0.05 OrthoFinder output from all 47 species
Zm00001e041753_P002 XYL4, ATBXL4,... bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 409 638
IPR001764 Glyco_hydro_3_N 120 364
IPR026891 Fn3-like 706 773
No external refs found!