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  5. LOC_Os11g07280.1

LOC_Os11g07280.1 (LOC_Os11g07280)


Aliases : LOC_Os11g07280

Description : subunit beta of cargo adaptor F-subcomplex


Gene families : OG0002649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g07280.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00238440 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.1 OrthoFinder output from all 47 species
AT4G31480 No alias Coatomer, beta subunit 0.15 OrthoFinder output from all 47 species
AT4G31490 No alias Coatomer, beta subunit 0.15 OrthoFinder output from all 47 species
Adi_g005173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005793 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Adi_g059781 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Adi_g109510 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Aev_g08571 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Ala_g12957 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Als_g16565 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Als_g31327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05342 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0279.g062259 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.09 OrthoFinder output from all 47 species
Cba_g01302 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Ceric.04G093900.1 Ceric.04G093900 subunit beta of cargo adaptor F-subcomplex & original... 0.11 OrthoFinder output from all 47 species
Ceric.24G063400.1 Ceric.24G063400 subunit beta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Cre04.g217921 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.09 OrthoFinder output from all 47 species
Dcu_g03132 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Dde_g09656 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01035511001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.13 OrthoFinder output from all 47 species
Gb_03760 No alias subunit beta of cargo adaptor F-subcomplex 0.1 OrthoFinder output from all 47 species
Gb_23100 No alias subunit beta of cargo adaptor F-subcomplex 0.13 OrthoFinder output from all 47 species
Len_g12104 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.09 OrthoFinder output from all 47 species
Lfl_g04220 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Lfl_g29820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431517g0010 No alias subunit beta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
MA_10432097g0010 No alias Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
MA_10432097g0020 No alias subunit beta of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
MA_230138g0010 No alias subunit beta of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 47 species
MA_704359g0010 No alias Coatomer subunit beta-1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g08450.1 No alias subunit beta of cargo adaptor F-subcomplex 0.15 OrthoFinder output from all 47 species
Msp_g15814 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Nbi_g02428 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Ore_g05742 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Ore_g17455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30253 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ore_g42071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02305 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Pnu_g33812 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g17439 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Sam_g19453 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Smo160340 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
Solyc01g007150.3.1 Solyc01g007150 subunit beta of cargo adaptor F-subcomplex 0.12 OrthoFinder output from all 47 species
Solyc10g081920.2.1 Solyc10g081920 subunit beta of cargo adaptor F-subcomplex 0.13 OrthoFinder output from all 47 species
Spa_g12851 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Spa_g56532 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Tin_g04740 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e009041_P001 Zm00001e009041 subunit beta of cargo adaptor F-subcomplex 0.14 OrthoFinder output from all 47 species
Zm00001e017416_P001 Zm00001e017416 subunit beta of cargo adaptor F-subcomplex 0.18 OrthoFinder output from all 47 species
Zm00001e025465_P001 Zm00001e025465 subunit beta of cargo adaptor F-subcomplex 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 21 473
IPR011710 Coatomer_bsu_C 673 811
IPR029446 COPB1_appendage_platform_dom 817 944
No external refs found!