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Aliases : PTAC6, LOC_Os11g01890
Description : PAP8/TAC6 cofactor of plastid-encoded RNA polymerase
Gene families : OG0007877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007877_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0005.g008949 | PTAC6 | cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.38G052000.1 | PTAC6, Ceric.38G052000 | cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g39158 | PTAC6 | cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g14377 | PTAC6 | cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008807001 | PTAC6 | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_31724 | PTAC6 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17801 | PTAC6 | cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g10030.1 | PTAC6 | PAP8/TAC6 cofactor of plastid-encoded RNA polymerase | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g00889 | PTAC6 | cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g40614 | PTAC6 | cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g057870.3.1 | PTAC6, Solyc04g057870 | PAP8/TAC6 cofactor of plastid-encoded RNA polymerase | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003747 | translation release factor activity | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | HCCA |
| MF | GO:0004784 | superoxide dismutase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004832 | valine-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006415 | translational termination | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006438 | valyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |