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Aliases : NCLPP4, CLPP4, LOC_Os10g43050
Description : proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex
Gene families : OG0000552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000552_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00165520 | NCLPP1, CLPP5,... | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00048p00200340 | NCLPP4, CLPP4,... | ATP-dependent Clp protease proteolytic subunit 4,... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G45390 | NCLPP4, CLPP4 | CLP protease P4 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g017748 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g022234 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g107266 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g11454 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g13540 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g02394 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01214 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11466 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0454.g071292 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021522.2 | NCLPP1, CLPP5, NCLPP5 | ATP-dependent Clp protease proteolytic subunit 5,... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01362 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18251 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g02563 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g03766 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02659 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g07899 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g52147 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g11662 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028130001 | NCLPP1, CLPP5, NCLPP5 | Protein degradation.peptidase families.serine-type... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01030894001 | CLPP3, NCLPP3 | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g01683 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18844 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28306 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| MA_12147g0010 | NCLPP4, CLPP4 | ATP-dependent Clp protease proteolytic subunit 4,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_806g0010 | NCLPP1, CLPP5, NCLPP5 | ATP-dependent Clp protease proteolytic subunit 5,... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g07790.1 | CLPP3, NCLPP3 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g07728 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g12183 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10039 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11137 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g17018 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c5_27640V3.1 | NCLPP4, CLPP4,... | CLP protease P4 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g00711 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10398 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g32919 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g001045 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023180 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06534 | No alias | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16959 | No alias | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g075750.4.1 | NCLPP4, CLPP4,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09973 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g10427 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04479 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e001449_P005 | NCLPP1, CLPP5,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e002511_P002 | NCLPP4, CLPP4,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e038326_P005 | NCLPP1, CLPP5,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003747 | translation release factor activity | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006415 | translational termination | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 80 | 252 |
| No external refs found! |