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Aliases : LOC_Os10g39550
Description : G2-like GARP transcription factor
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00224230 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00048p00192390 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00106p00040830 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G32240 | KAN2 | Homeodomain-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G02060 | No alias | Homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G13640 | UNE16 | Homeodomain-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g006433 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03847 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g04653 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06660 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g08018 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g36053 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g22830 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04915 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g10728 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15748 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30198 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g47265 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04205 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene10267.t2 | Aspi01Gene10267 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14328.t1 | KAN, KAN1,... | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene19889.t1 | Aspi01Gene19889 | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene21949.t1 | Aspi01Gene21949 | transcription factor *(CLAUSA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009458 | No alias | not classified & original description: CDS=1-426 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009521 | No alias | not classified & original description: CDS=1-1092 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05188 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15907 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16380 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16839 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19840 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g21846 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G033500.1 | PHL1, Ceric.12G033500 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G021000.1 | KAN, KAN1,... | KANADI-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g27691 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03890 | KAN2 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11678 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g16600 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g21452 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03380 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g06852 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08285 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g21970 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g22986 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g32284 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01032776001 | No alias | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_17469 | KAN, KAN1 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432937g0010 | KAN4, ATS | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| MA_218023g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g04970.1 | KAN, KAN1 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g12418 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19411 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36046 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44093 | KAN4, ATS | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03399 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g26301 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g30534 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g06354 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g24931 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31777 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002208 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005338 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006600 | KAN4, ATS | KANADI-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010896 | No alias | transcription factor *(CLAUSA) & original description: CDS=80-784 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12596 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18448 | No alias | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27536 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g076670.3.1 | Solyc02g076670 | Putative Myb family transcription factor At1g14600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g080730.2.1 | Solyc02g080730 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g008480.2.1 | Solyc04g008480 | G2-like GARP transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g066340.4.1 | KAN2, Solyc06g066340 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g076400.3.1 | KAN2, Solyc08g076400 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g085620.2.1 | Solyc10g085620 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12933 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000237_P002 | Zm00001e000237 | G2-like GARP transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e003093_P001 | KAN4, ATS, Zm00001e003093 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005797_P001 | KAN4, ATS, Zm00001e005797 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009294_P001 | Zm00001e009294 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015514_P001 | KAN2, Zm00001e015514 | G2-like GARP transcription factor | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e022454_P001 | Zm00001e022454 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e030364_P002 | Zm00001e030364 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e033757_P002 | Zm00001e033757 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035893_P001 | Zm00001e035893 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 21 | 71 |
| No external refs found! |