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  5. LOC_Os10g38274.1

LOC_Os10g38274.1 (LOC_Os10g38274)


Aliases : LOC_Os10g38274

Description : subunit c of membrane CF0 subcomplex of ATP synthase complex


Gene families : OG0009638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009638_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os10g38274.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00390p00012600 No alias Photosynthesis.photophosphorylation.ATP synthase... 0.12 OrthoFinder output from all 47 species
ATCG00140 ATPH ATP synthase subunit C family protein 0.36 OrthoFinder output from all 47 species
Azfi_s0680.g082015 No alias not classified & original description: CDS=1-297 0.03 OrthoFinder output from all 47 species
Ceric.01G056700.1 ATPH, Ceric.01G056700 subunit c of membrane CF0 subcomplex of ATP synthase... 0.12 OrthoFinder output from all 47 species
Ceric.09G054200.1 ATPH, Ceric.09G054200 subunit c of membrane CF0 subcomplex of ATP synthase... 0.1 OrthoFinder output from all 47 species
Ceric.10G061100.1 ATPH, Ceric.10G061100 not classified & original description: pacid=50613557... 0.15 OrthoFinder output from all 47 species
Ceric.13G052500.1 ATPH, Ceric.13G052500 subunit c of membrane CF0 subcomplex of ATP synthase... 0.13 OrthoFinder output from all 47 species
GSVIVT01021581001 No alias ATP synthase subunit c, chloroplastic... 0.14 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020286 ATPH not classified & original description: CDS=1-210 0.1 OrthoFinder output from all 47 species
Smo137813 ATPH Photosynthesis.photophosphorylation.ATP synthase... 0.03 OrthoFinder output from all 47 species
Solyc00g500321.1.1 ATPH, Solyc00g500321 no hits & (original description: none) 0.39 OrthoFinder output from all 47 species
Solyc00g500334.1.1 ATPH, Solyc00g500334 no hits & (original description: none) 0.39 OrthoFinder output from all 47 species
Solyc08g028860.1.1 ATPH, Solyc08g028860 subunit c of membrane CF0 subcomplex of ATP synthase complex 0.39 OrthoFinder output from all 47 species
Solyc09g059660.1.1 ATPH, Solyc09g059660 subunit c of membrane CF0 subcomplex of ATP synthase complex 0.03 OrthoFinder output from all 47 species
Solyc10g044550.1.1 ATPH, Solyc10g044550 subunit c of membrane CF0 subcomplex of ATP synthase complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015078 proton transmembrane transporter activity IEA Interproscan
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEA Interproscan
BP GO:1902600 proton transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002379 ATPase_proteolipid_c-like_dom 11 73
No external refs found!