LOC_Os10g38272.1 (ATPF, LOC_Os10g38272)

Aliases : ATPF, LOC_Os10g38272

Description : subunit b of membrane CF0 subcomplex of ATP synthase complex

Gene families : OG0008773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008773_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g38272.1
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
ATCG00130	ATPF	ATPase, F0 complex, subunit B/B', bacterial/chloroplast	0.43	OrthoFinder output from all 47 species
Aev_g16148	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.35	OrthoFinder output from all 47 species
Aob_g35727	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.17	OrthoFinder output from all 47 species
Azfi_s0009.g011763	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.07	OrthoFinder output from all 47 species
Azfi_s0026.g023369	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.06	OrthoFinder output from all 47 species
Ceric.01G056800.1	ATPF, Ceric.01G056800	subunit b of membrane CF0 subcomplex of ATP synthase...	0.14	OrthoFinder output from all 47 species
Ceric.01G105200.1	ATPF, Ceric.01G105200	subunit b of membrane CF0 subcomplex of ATP synthase...	0.02	OrthoFinder output from all 47 species
Ceric.02G012400.1	ATPF, Ceric.02G012400	subunit b of membrane CF0 subcomplex of ATP synthase...	0.11	OrthoFinder output from all 47 species
Ceric.11G075700.1	Ceric.11G075700	subunit b of membrane CF0 subcomplex of ATP synthase...	0.17	OrthoFinder output from all 47 species
Ceric.13G052600.1	ATPF, Ceric.13G052600	subunit b of membrane CF0 subcomplex of ATP synthase...	0.09	OrthoFinder output from all 47 species
Ceric.14G033500.1	Ceric.14G033500	subunit b of membrane CF0 subcomplex of ATP synthase...	0.16	OrthoFinder output from all 47 species
Ceric.19G010600.1	ATPF, Ceric.19G010600	subunit b of membrane CF0 subcomplex of ATP synthase...	0.18	OrthoFinder output from all 47 species
Ceric.29G005200.1	ATPF, Ceric.29G005200	subunit b of membrane CF0 subcomplex of ATP synthase...	0.42	OrthoFinder output from all 47 species
Ceric.38G010500.1	Ceric.38G010500	subunit b of membrane CF0 subcomplex of ATP synthase...	0.35	OrthoFinder output from all 47 species
Dcu_g12660	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.1	OrthoFinder output from all 47 species
LOC_Os09g08464.1	LOC_Os09g08464	ATP synthase subunit b, chloroplastic OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Nbi_g01702	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.12	OrthoFinder output from all 47 species
Pir_g18656	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.23	OrthoFinder output from all 47 species
Pnu_g27868	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s2240.g028297	No alias	not classified & original description: CDS=1-537	0.11	OrthoFinder output from all 47 species
Sam_g33436	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.07	OrthoFinder output from all 47 species
Solyc00g500322.1.1	ATPF, Solyc00g500322	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.44	OrthoFinder output from all 47 species
Solyc00g500333.1.1	ATPF, Solyc00g500333	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.03	OrthoFinder output from all 47 species
Solyc10g044535.1.1	ATPF, Solyc10g044535	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.44	OrthoFinder output from all 47 species
Spa_g18388	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	IEA	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEA	Interproscan
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009539	photosystem II reaction center	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
BP	GO:0015977	carbon fixation	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016984	ribulose-bisphosphate carboxylase activity	IEP	HCCA
BP	GO:0017004	cytochrome complex assembly	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
CC	GO:0031361	obsolete integral component of thylakoid membrane	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002146	ATP_synth_b/b'su_bac/chlpt	26	156

External Links

No external refs found!

LOC_Os10g38272.1 (ATPF, LOC_Os10g38272)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation