LOC_Os09g24530.1 (LOC_Os09g24530)


Aliases : LOC_Os09g24530

Description : lysine N-methyltransferase involved in RuBisCo regulation


Gene families : OG0005139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005139_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g24530.1

Target Alias Description ECC score Gene Family Method Actions
AT1G14030 No alias Rubisco methyltransferase family protein 0.13 OrthoFinder output from all 47 species
Aev_g01078 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aob_g07315 No alias EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Aop_g68721 No alias EC_2.1 transferase transferring one-carbon group &... 0.08 OrthoFinder output from all 47 species
Aspi01Gene41753.t1 Aspi01Gene41753 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Azfi_s0515.g074962 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cba_g12451 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ceric.11G013100.1 Ceric.11G013100 EC_2.1 transferase transferring one-carbon group &... 0.08 OrthoFinder output from all 47 species
Cre16.g661350 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Dac_g15224 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Dde_g24236 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01003217001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.12 OrthoFinder output from all 47 species
Gb_38065 No alias lysine N-methyltransferase involved in RuBisCo regulation 0.05 OrthoFinder output from all 47 species
Lfl_g11391 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
MA_10018022g0010 No alias Ribulose-1,5 bisphosphate carboxylase/oxygenase large... 0.03 OrthoFinder output from all 47 species
Mp1g22860.1 No alias lysine N-methyltransferase involved in RuBisCo regulation 0.02 OrthoFinder output from all 47 species
Msp_g07873 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Nbi_g08732 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pir_g12136 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ppi_g31578 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Smo139232 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Solyc05g013150.4.1 Solyc05g013150 lysine N-methyltransferase involved in RuBisCo regulation 0.03 OrthoFinder output from all 47 species
Solyc05g013160.4.1 Solyc05g013160 lysine N-methyltransferase involved in RuBisCo regulation 0.09 OrthoFinder output from all 47 species
Spa_g09551 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Tin_g11444 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Zm00001e034101_P002 Zm00001e034101 lysine N-methyltransferase involved in RuBisCo regulation 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 87 295
IPR015353 Rubisco_LSMT_subst-bd 329 453
No external refs found!