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  5. LOC_Os08g41460.2

LOC_Os08g41460.2 (PGR5-LIKE A, LOC_Os08g41460)


Aliases : PGR5-LIKE A, LOC_Os08g41460

Description : component PGRL1-like of cyclic electron flow PGR5/PGRL1 complex


Gene families : OG0005208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g41460.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00191890 PGR5-LIKE A,... Photosynthesis.photophosphorylation.cyclic electron... 0.09 OrthoFinder output from all 47 species
AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.09 OrthoFinder output from all 47 species
Adi_g078779 PGRL1B component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.03 OrthoFinder output from all 47 species
Aev_g03719 PGRL1B component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.04 OrthoFinder output from all 47 species
Ala_g34500 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.06 OrthoFinder output from all 47 species
Als_g11881 PGRL1B component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.05 OrthoFinder output from all 47 species
Aob_g43333 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.03 OrthoFinder output from all 47 species
Aop_g03139 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.09 OrthoFinder output from all 47 species
Azfi_s0056.g034205 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.02 OrthoFinder output from all 47 species
Cba_g14514 PGRL1B component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.07 OrthoFinder output from all 47 species
Ceric.16G020700.1 PGR5-LIKE A,... component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.11 OrthoFinder output from all 47 species
Cre07.g340200 PGRL1B Photosynthesis.photophosphorylation.cyclic electron... 0.03 OrthoFinder output from all 47 species
Dac_g33572 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.08 OrthoFinder output from all 47 species
Dcu_g46680 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.09 OrthoFinder output from all 47 species
Dde_g08207 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.04 OrthoFinder output from all 47 species
Ehy_g09686 PGRL1B component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.06 OrthoFinder output from all 47 species
GSVIVT01019890001 PGR5-LIKE A Photosynthesis.photophosphorylation.cyclic electron... 0.13 OrthoFinder output from all 47 species
Gb_14341 PGRL1B component PGRL1-like of cyclic electron flow PGR5/PGRL1 complex 0.03 OrthoFinder output from all 47 species
Len_g57042 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.03 OrthoFinder output from all 47 species
Lfl_g06512 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.09 OrthoFinder output from all 47 species
MA_117727g0010 PGRL1B component PGRL1-like of cyclic electron flow PGR5/PGRL1 complex 0.07 OrthoFinder output from all 47 species
MA_5845013g0010 PGR5-LIKE A component PGRL1-like of cyclic electron flow PGR5/PGRL1 complex 0.06 OrthoFinder output from all 47 species
Mp5g09890.1 PGR5-LIKE A component PGRL1-like of cyclic electron flow PGR5/PGRL1 complex 0.08 OrthoFinder output from all 47 species
Msp_g04737 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.09 OrthoFinder output from all 47 species
Nbi_g05709 PGR5-LIKE A component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.07 OrthoFinder output from all 47 species
Ore_g09008 PGRL1B component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.13 OrthoFinder output from all 47 species
Pir_g04154 PGRL1B component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.04 OrthoFinder output from all 47 species
Ppi_g16801 PGRL1B component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0350.g027293 No alias not classified & original description: CDS=256-603 0.03 OrthoFinder output from all 47 species
Sam_g07253 No alias component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.04 OrthoFinder output from all 47 species
Smo66389 PGR5-LIKE A Photosynthesis.photophosphorylation.cyclic electron... 0.05 OrthoFinder output from all 47 species
Solyc08g080050.4.1 PGR5-LIKE A,... component PGRL1-like of cyclic electron flow PGR5/PGRL1 complex 0.09 OrthoFinder output from all 47 species
Spa_g17149 PGRL1B component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.09 OrthoFinder output from all 47 species
Tin_g12405 PGRL1B component *(PGRL1) of cyclic electron flow PGR5-PGRL1... 0.06 OrthoFinder output from all 47 species
Zm00001e006418_P004 PGR5-LIKE A,... component PGRL1-like of cyclic electron flow PGR5/PGRL1 complex 0.09 OrthoFinder output from all 47 species
Zm00001e033337_P003 PGR5-LIKE A,... component PGRL1-like of cyclic electron flow PGR5/PGRL1 complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!