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  5. LOC_Os08g12840.1

LOC_Os08g12840.1 (LOC_Os08g12840)


Aliases : LOC_Os08g12840

Description : hydroxyacyl-ACP dehydratase (ptHD)


Gene families : OG0004877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g12840.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00201890 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.06 OrthoFinder output from all 47 species
AT2G22230 No alias Thioesterase superfamily protein 0.15 OrthoFinder output from all 47 species
AT5G10160 No alias Thioesterase superfamily protein 0.14 OrthoFinder output from all 47 species
Als_g31791 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51334 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38799.t1 Aspi01Gene38799 hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G048200.1 Ceric.28G048200 hydroxyacyl-ACP dehydratase *(ptHD)) & original... 0.12 OrthoFinder output from all 47 species
Cre03.g208050 No alias Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.01 OrthoFinder output from all 47 species
Dde_g00398 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.1 OrthoFinder output from all 47 species
Mp3g04910.1 No alias hydroxyacyl-ACP dehydratase (ptHD) 0.06 OrthoFinder output from all 47 species
Msp_g12188 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c24_9920V3.1 Pp3c24_9920 Thioesterase superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g04951 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017510 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original... 0.04 OrthoFinder output from all 47 species
Solyc01g105060.3.1 Solyc01g105060 hydroxyacyl-ACP dehydratase (ptHD) 0.07 OrthoFinder output from all 47 species
Zm00001e021571_P001 Zm00001e021571 hydroxyacyl-ACP dehydratase (ptHD) 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013114 FabA_FabZ 82 207
No external refs found!