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  5. LOC_Os08g02690.1

LOC_Os08g02690.1 (LOC_Os08g02690)


Aliases : LOC_Os08g02690

Description : S6K-dependent protein translation regulator (MRF)


Gene families : OG0002034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g02690.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g056684 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Adi_g102826 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Als_g14862 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Als_g22797 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Als_g38117 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Cre09.g415800 No alias Multi-process regulation.TOR signalling pathway.MRF... 0.02 OrthoFinder output from all 47 species
Lfl_g02119 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Nbi_g04457 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Pir_g07457 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Spa_g02444 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Spa_g22706 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Spa_g53345 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Zm00001e007783_P002 Zm00001e007783 S6K-dependent protein translation regulator (MRF) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 436 545
IPR003891 Initiation_fac_eIF4g_MI 138 248
IPR003891 Initiation_fac_eIF4g_MI 304 412
IPR003891 Initiation_fac_eIF4g_MI 599 706
No external refs found!