LOC_Os07g42960.1 (LOC_Os07g42960)

Aliases : LOC_Os07g42960

Description : 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene families : OG0000874 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000874_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g42960.1
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00167510	evm_27.TU.AmTr_v1...	Amino acid metabolism.biosynthesis.shikimate...	0.06	OrthoFinder output from all 47 species
AMTR_s00008p00262380	DHS2,...	Amino acid metabolism.biosynthesis.shikimate...	0.09	OrthoFinder output from all 47 species
AT1G22410	No alias	Class-II DAHP synthetase family protein	0.09	OrthoFinder output from all 47 species
AT4G39980	DHS1	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1	0.03	OrthoFinder output from all 47 species
Adi_g022905	DHS2	EC_2.5 transferase transferring alkyl or aryl group,...	0.05	OrthoFinder output from all 47 species
Adi_g058266	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Adi_g105263	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Ala_g04801	DHS2	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Als_g22068	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Aop_g08932	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.06	OrthoFinder output from all 47 species
Aspi01Gene17382.t1	Aspi01Gene17382	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Azfi_s0162.g054142	DHS2	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Cba_g25880	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Ceric.04G015600.1	Ceric.04G015600	EC_2.5 transferase transferring alkyl or aryl group,...	0.06	OrthoFinder output from all 47 species
Ceric.15G008400.1	Ceric.15G008400	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Ceric.22G067800.1	Ceric.22G067800	EC_2.5 transferase transferring alkyl or aryl group,...	0.1	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000863.21	DHS1	Amino acid metabolism.biosynthesis.shikimate...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000863.22	No alias	Enzyme classification.EC_2 transferases.EC_2.5...	0.02	OrthoFinder output from all 47 species
Dac_g07948	DHS2	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Dcu_g01230	DHS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.05	OrthoFinder output from all 47 species
Dcu_g07522	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Dde_g24653	DHS2	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Ehy_g02586	DHS2	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
GSVIVT01006634001	No alias	Amino acid metabolism.biosynthesis.shikimate...	0.07	OrthoFinder output from all 47 species
GSVIVT01009070001	No alias	Amino acid metabolism.biosynthesis.shikimate...	0.07	OrthoFinder output from all 47 species
Gb_34129	DHS1	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	0.04	OrthoFinder output from all 47 species
Len_g16050	DHS2	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Lfl_g07976	DHS2	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
MA_10436001g0020	DHS2	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	0.04	OrthoFinder output from all 47 species
MA_10437122g0020	No alias	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	0.03	OrthoFinder output from all 47 species
MA_72126g0010	DHS2	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	0.06	OrthoFinder output from all 47 species
Msp_g18564	DHS2	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Ore_g35773	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Pir_g17667	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Ppi_g12274	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Ppi_g31831	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003169	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019765	No alias	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Solyc04g074480.3.1	Solyc04g074480	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	0.05	OrthoFinder output from all 47 species
Zm00001e001882_P001	Zm00001e001882	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	0.04	OrthoFinder output from all 47 species
Zm00001e035581_P002	Zm00001e035581	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid metabolic process	None	Extended
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004107	chorismate synthase activity	IEP	HCCA
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002480	DAHP_synth_2	78	514

External Links

No external refs found!

LOC_Os07g42960.1 (LOC_Os07g42960)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation