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  5. LOC_Os07g42600.1

LOC_Os07g42600.1 (AlaAT1, LOC_Os07g42600)


Aliases : AlaAT1, LOC_Os07g42600

Description : alanine aminotransferase


Gene families : OG0000930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g42600.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Adi_g024970 AlaAT1 EC_2.6 transferase transferring nitrogenous group &... 0.02 OrthoFinder output from all 47 species
Aev_g10472 AlaAT1 EC_2.6 transferase transferring nitrogenous group &... 0.02 OrthoFinder output from all 47 species
Aop_g20469 AlaAT1 EC_2.6 transferase transferring nitrogenous group &... 0.02 OrthoFinder output from all 47 species
Ceric.06G011200.1 AlaAT1, Ceric.06G011200 EC_2.6 transferase transferring nitrogenous group &... 0.09 OrthoFinder output from all 47 species
Cre06.g284700 AlaAT1 Amino acid metabolism.biosynthesis.pyruvate... 0.01 OrthoFinder output from all 47 species
Ehy_g06833 AlaAT1 EC_2.6 transferase transferring nitrogenous group &... 0.02 OrthoFinder output from all 47 species
Lfl_g03086 AlaAT1 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
Msp_g14863 AlaAT1 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
Ppi_g02166 GGT2, AOAT2 EC_2.6 transferase transferring nitrogenous group &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009323 AlaAT1 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g19597 No alias EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
Zm00001e035557_P001 AlaAT1, Zm00001e035557 alanine aminotransferase 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 171 519
No external refs found!